Gene : Pp3c18_12360 P. patens v3.3
Defline:  (1 of 1) PTHR23331 - CXYORF1 Genomic Order:  481
Name:  ? Pp3c18_12360 Secondary Identifier:  ? PAC:32981194
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c18_12360 0.5kb upstream 0.5kb upstream 9394 true Chr18: 9086978-9096371 Physcomitrium patens
Pp3c18_12360 0.5kb upstream 0.5kb upstream 500 false Chr18: 9095872-9096371 Physcomitrium patens
Pp3c18_12360 0.5kb downstream 0.5kb downstream 9394 true Chr18: 9086478-9095871 Physcomitrium patens
Pp3c18_12360 0.5kb downstream 0.5kb downstream 500 false Chr18: 9086478-9086977 Physcomitrium patens
Pp3c18_12360 1.0kb upstream 1.0kb upstream 9894 true Chr18: 9086978-9096871 Physcomitrium patens
Pp3c18_12360 1.0kb upstream 1.0kb upstream 1000 false Chr18: 9095872-9096871 Physcomitrium patens
Pp3c18_12360 1.0kb downstream 1.0kb downstream 9894 true Chr18: 9085978-9095871 Physcomitrium patens
Pp3c18_12360 1.0kb downstream 1.0kb downstream 1000 false Chr18: 9085978-9086977 Physcomitrium patens
Pp3c18_12360 2.0kb upstream 2.0kb upstream 10894 true Chr18: 9086978-9097871 Physcomitrium patens
Pp3c18_12360 2.0kb upstream 2.0kb upstream 2000 false Chr18: 9095872-9097871 Physcomitrium patens
Pp3c18_12360 2.0kb downstream 2.0kb downstream 10894 true Chr18: 9084978-9095871 Physcomitrium patens
Pp3c18_12360 2.0kb downstream 2.0kb downstream 2000 false Chr18: 9084978-9086977 Physcomitrium patens
Pp3c18_12360 5.0kb upstream 5.0kb upstream 13894 true Chr18: 9086978-9100871 Physcomitrium patens
Pp3c18_12360 5.0kb upstream 5.0kb upstream 5000 false Chr18: 9095872-9100871 Physcomitrium patens
Pp3c18_12360 5.0kb downstream 5.0kb downstream 13894 true Chr18: 9081978-9095871 Physcomitrium patens
Pp3c18_12360 5.0kb downstream 5.0kb downstream 5000 false Chr18: 9081978-9086977 Physcomitrium patens
Pp3c18_12360 10.0kb upstream 10.0kb upstream 18894 true Chr18: 9086978-9105871 Physcomitrium patens
Pp3c18_12360 10.0kb upstream 10.0kb upstream 10000 false Chr18: 9095872-9105871 Physcomitrium patens
Pp3c18_12360 10.0kb downstream 10.0kb downstream 18894 true Chr18: 9076978-9095871 Physcomitrium patens
Pp3c18_12360 10.0kb downstream 10.0kb downstream 10000 false Chr18: 9076978-9086977 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343706 5274 Embryophyte View MSA
123379860 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.876        
cufflinks 6.587        
cufflinks 7.685        
cufflinks 7.011        
cufflinks 7.056        
cufflinks 5.521        
cufflinks 5.089        
cufflinks 7.534        
cufflinks 6.38        
cufflinks 6.206        
cufflinks 8.431       High
cufflinks 6.64        
cufflinks 4.924        
cufflinks 5.501        
cufflinks 5.244        
cufflinks 5.821        
cufflinks 5.423        
cufflinks 4.943        
cufflinks 3.065       Low
cufflinks 4.787        
cufflinks 7.225        
cufflinks 7.044        
cufflinks 3.241       Low
cufflinks 8.34       High
cufflinks 7.34        
cufflinks 9.648       High
cufflinks 5.996        
cufflinks 8.711       High
cufflinks 6.367        
cufflinks 5.805        

0 Strain