Gene : Pp3c18_14600 P. patens v3.3
Defline:  (1 of 2) PF03114//PF14604 - BAR domain (BAR) // Variant SH3 domain (SH3_9) Genomic Order:  586
Name:  ? Pp3c18_14600 Secondary Identifier:  ? PAC:32981506
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c18_14600 0.5kb upstream 0.5kb upstream 3989 true Chr18: 10505256-10509244 Physcomitrium patens
Pp3c18_14600 0.5kb upstream 0.5kb upstream 500 false Chr18: 10508745-10509244 Physcomitrium patens
Pp3c18_14600 0.5kb downstream 0.5kb downstream 3989 true Chr18: 10504756-10508744 Physcomitrium patens
Pp3c18_14600 0.5kb downstream 0.5kb downstream 500 false Chr18: 10504756-10505255 Physcomitrium patens
Pp3c18_14600 1.0kb upstream 1.0kb upstream 4489 true Chr18: 10505256-10509744 Physcomitrium patens
Pp3c18_14600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 10508745-10509744 Physcomitrium patens
Pp3c18_14600 1.0kb downstream 1.0kb downstream 4489 true Chr18: 10504256-10508744 Physcomitrium patens
Pp3c18_14600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 10504256-10505255 Physcomitrium patens
Pp3c18_14600 2.0kb upstream 2.0kb upstream 5489 true Chr18: 10505256-10510744 Physcomitrium patens
Pp3c18_14600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 10508745-10510744 Physcomitrium patens
Pp3c18_14600 2.0kb downstream 2.0kb downstream 5489 true Chr18: 10503256-10508744 Physcomitrium patens
Pp3c18_14600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 10503256-10505255 Physcomitrium patens
Pp3c18_14600 5.0kb upstream 5.0kb upstream 8489 true Chr18: 10505256-10513744 Physcomitrium patens
Pp3c18_14600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 10508745-10513744 Physcomitrium patens
Pp3c18_14600 5.0kb downstream 5.0kb downstream 8489 true Chr18: 10500256-10508744 Physcomitrium patens
Pp3c18_14600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 10500256-10505255 Physcomitrium patens
Pp3c18_14600 10.0kb upstream 10.0kb upstream 13489 true Chr18: 10505256-10518744 Physcomitrium patens
Pp3c18_14600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 10508745-10518744 Physcomitrium patens
Pp3c18_14600 10.0kb downstream 10.0kb downstream 13489 true Chr18: 10495256-10508744 Physcomitrium patens
Pp3c18_14600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 10495256-10505255 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121352533 5274 Embryophyte View MSA
123382849 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.373        
cufflinks 1.964        
cufflinks 1.531        
cufflinks 1.723        
cufflinks 0.415       Low
cufflinks 2.245        
cufflinks 1.57        
cufflinks 1.541        
cufflinks 4.715       High
cufflinks 1.124        
cufflinks 2.32        
cufflinks 1.234        
cufflinks 0.249       Low
cufflinks 0.616       Low
cufflinks 3.101       High
cufflinks 2.622        
cufflinks 0.393       Low
cufflinks 1.983        
cufflinks 2.554        
cufflinks 1.168        
cufflinks 1.975        
cufflinks 0.232       Low
cufflinks 1.61        
cufflinks 1.171        
cufflinks 1.504        
cufflinks 2.399        
cufflinks 0.814        
cufflinks 0.785        
cufflinks 2.448        
cufflinks 1.702        

0 Strain