Gene : Pp3c19_20260 P. patens v3.3
Defline:  (1 of 6) PTHR10943 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT Genomic Order:  923
Name:  ? Pp3c19_20260 Secondary Identifier:  ? PAC:32938034
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c19_20260 0.5kb upstream 0.5kb upstream 8738 true Chr19: 13497980-13506717 Physcomitrium patens
Pp3c19_20260 0.5kb upstream 0.5kb upstream 500 false Chr19: 13506218-13506717 Physcomitrium patens
Pp3c19_20260 0.5kb downstream 0.5kb downstream 8738 true Chr19: 13497480-13506217 Physcomitrium patens
Pp3c19_20260 0.5kb downstream 0.5kb downstream 500 false Chr19: 13497480-13497979 Physcomitrium patens
Pp3c19_20260 1.0kb upstream 1.0kb upstream 9238 true Chr19: 13497980-13507217 Physcomitrium patens
Pp3c19_20260 1.0kb upstream 1.0kb upstream 1000 false Chr19: 13506218-13507217 Physcomitrium patens
Pp3c19_20260 1.0kb downstream 1.0kb downstream 9238 true Chr19: 13496980-13506217 Physcomitrium patens
Pp3c19_20260 1.0kb downstream 1.0kb downstream 1000 false Chr19: 13496980-13497979 Physcomitrium patens
Pp3c19_20260 2.0kb upstream 2.0kb upstream 10238 true Chr19: 13497980-13508217 Physcomitrium patens
Pp3c19_20260 2.0kb upstream 2.0kb upstream 2000 false Chr19: 13506218-13508217 Physcomitrium patens
Pp3c19_20260 2.0kb downstream 2.0kb downstream 10238 true Chr19: 13495980-13506217 Physcomitrium patens
Pp3c19_20260 2.0kb downstream 2.0kb downstream 2000 false Chr19: 13495980-13497979 Physcomitrium patens
Pp3c19_20260 5.0kb upstream 5.0kb upstream 13238 true Chr19: 13497980-13511217 Physcomitrium patens
Pp3c19_20260 5.0kb upstream 5.0kb upstream 5000 false Chr19: 13506218-13511217 Physcomitrium patens
Pp3c19_20260 5.0kb downstream 5.0kb downstream 13238 true Chr19: 13492980-13506217 Physcomitrium patens
Pp3c19_20260 5.0kb downstream 5.0kb downstream 5000 false Chr19: 13492980-13497979 Physcomitrium patens
Pp3c19_20260 10.0kb upstream 10.0kb upstream 18238 true Chr19: 13497980-13516217 Physcomitrium patens
Pp3c19_20260 10.0kb upstream 10.0kb upstream 10000 false Chr19: 13506218-13516217 Physcomitrium patens
Pp3c19_20260 10.0kb downstream 10.0kb downstream 18238 true Chr19: 13487980-13506217 Physcomitrium patens
Pp3c19_20260 10.0kb downstream 10.0kb downstream 10000 false Chr19: 13487980-13497979 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123428994 5275 Viridiplantae View MSA
121346933 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.309        
cufflinks 13.814        
cufflinks 14.732        
cufflinks 16.273        
cufflinks 12.798        
cufflinks 15.689        
cufflinks 13.108        
cufflinks 14.623        
cufflinks 13.883        
cufflinks 13.201        
cufflinks 16.446       High
cufflinks 13.139        
cufflinks 14.314        
cufflinks 18.132       High
cufflinks 15.141        
cufflinks 13.547        
cufflinks 8.975       Low
cufflinks 13.657        
cufflinks 13.765        
cufflinks 17.042       High
cufflinks 10.792       Low
cufflinks 7.57       Low
cufflinks 13.978     High  
cufflinks 17.676       High
cufflinks 13.66        
cufflinks 13.206        
cufflinks 13.493     High  
cufflinks 14.551        
cufflinks 9.867       Low
cufflinks 15.769        

0 Strain