Gene : Pp3c19_14460 P. patens v3.3
Genomic Order:  679 Name:  ? Pp3c19_14460
Secondary Identifier:  ? PAC:32938729
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c19_14460 0.5kb upstream 0.5kb upstream 5024 true Chr19: 9476178-9481201 Physcomitrium patens
Pp3c19_14460 0.5kb upstream 0.5kb upstream 500 false Chr19: 9480702-9481201 Physcomitrium patens
Pp3c19_14460 0.5kb downstream 0.5kb downstream 5024 true Chr19: 9475678-9480701 Physcomitrium patens
Pp3c19_14460 0.5kb downstream 0.5kb downstream 500 false Chr19: 9475678-9476177 Physcomitrium patens
Pp3c19_14460 1.0kb upstream 1.0kb upstream 5524 true Chr19: 9476178-9481701 Physcomitrium patens
Pp3c19_14460 1.0kb upstream 1.0kb upstream 1000 false Chr19: 9480702-9481701 Physcomitrium patens
Pp3c19_14460 1.0kb downstream 1.0kb downstream 5524 true Chr19: 9475178-9480701 Physcomitrium patens
Pp3c19_14460 1.0kb downstream 1.0kb downstream 1000 false Chr19: 9475178-9476177 Physcomitrium patens
Pp3c19_14460 2.0kb upstream 2.0kb upstream 6524 true Chr19: 9476178-9482701 Physcomitrium patens
Pp3c19_14460 2.0kb upstream 2.0kb upstream 2000 false Chr19: 9480702-9482701 Physcomitrium patens
Pp3c19_14460 2.0kb downstream 2.0kb downstream 6524 true Chr19: 9474178-9480701 Physcomitrium patens
Pp3c19_14460 2.0kb downstream 2.0kb downstream 2000 false Chr19: 9474178-9476177 Physcomitrium patens
Pp3c19_14460 5.0kb upstream 5.0kb upstream 9524 true Chr19: 9476178-9485701 Physcomitrium patens
Pp3c19_14460 5.0kb upstream 5.0kb upstream 5000 false Chr19: 9480702-9485701 Physcomitrium patens
Pp3c19_14460 5.0kb downstream 5.0kb downstream 9524 true Chr19: 9471178-9480701 Physcomitrium patens
Pp3c19_14460 5.0kb downstream 5.0kb downstream 5000 false Chr19: 9471178-9476177 Physcomitrium patens
Pp3c19_14460 10.0kb upstream 10.0kb upstream 14524 true Chr19: 9476178-9490701 Physcomitrium patens
Pp3c19_14460 10.0kb upstream 10.0kb upstream 10000 false Chr19: 9480702-9490701 Physcomitrium patens
Pp3c19_14460 10.0kb downstream 10.0kb downstream 14524 true Chr19: 9466178-9480701 Physcomitrium patens
Pp3c19_14460 10.0kb downstream 10.0kb downstream 10000 false Chr19: 9466178-9476177 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345112 5274 Embryophyte View MSA
123425556 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.229        
cufflinks 0.876       Low
cufflinks 1.808        
cufflinks 5.768        
cufflinks 14.852       High
cufflinks 0.821       Low
cufflinks 22.578     High High
cufflinks 4.594        
cufflinks 8.479        
cufflinks 7.692        
cufflinks 1.182        
cufflinks 13.236       High
cufflinks 6.057        
cufflinks 0.294       Low
cufflinks 1.291        
cufflinks 0.327       Low
cufflinks 4.178        
cufflinks 1.306        
cufflinks 1.43        
cufflinks 1.5        
cufflinks 4.433        
cufflinks 22.698     High High
cufflinks 2.209        
cufflinks 15.603       High
cufflinks 5.234        
cufflinks 0.735       Low
cufflinks 0.987        
cufflinks 2.206        
cufflinks 0.933        
cufflinks 4.195        

0 Strain