Gene : Pp3c19_1630 P. patens v3.3
Defline:  (1 of 1) 2.7.1.130 - Tetraacyldisaccharide 4'-kinase / Lipid-A 4'-kinase Genomic Order:  77
Name:  ? Pp3c19_1630 Secondary Identifier:  ? PAC:32939873
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens NAGLIPASYN-PWY Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c19_1630 0.5kb upstream 0.5kb upstream 4012 true Chr19: 723779-727790 Physcomitrium patens
Pp3c19_1630 0.5kb upstream 0.5kb upstream 500 false Chr19: 723779-724278 Physcomitrium patens
Pp3c19_1630 0.5kb downstream 0.5kb downstream 4012 true Chr19: 724279-728290 Physcomitrium patens
Pp3c19_1630 0.5kb downstream 0.5kb downstream 500 false Chr19: 727791-728290 Physcomitrium patens
Pp3c19_1630 1.0kb upstream 1.0kb upstream 4512 true Chr19: 723279-727790 Physcomitrium patens
Pp3c19_1630 1.0kb upstream 1.0kb upstream 1000 false Chr19: 723279-724278 Physcomitrium patens
Pp3c19_1630 1.0kb downstream 1.0kb downstream 4512 true Chr19: 724279-728790 Physcomitrium patens
Pp3c19_1630 1.0kb downstream 1.0kb downstream 1000 false Chr19: 727791-728790 Physcomitrium patens
Pp3c19_1630 2.0kb upstream 2.0kb upstream 5512 true Chr19: 722279-727790 Physcomitrium patens
Pp3c19_1630 2.0kb upstream 2.0kb upstream 2000 false Chr19: 722279-724278 Physcomitrium patens
Pp3c19_1630 2.0kb downstream 2.0kb downstream 5512 true Chr19: 724279-729790 Physcomitrium patens
Pp3c19_1630 2.0kb downstream 2.0kb downstream 2000 false Chr19: 727791-729790 Physcomitrium patens
Pp3c19_1630 5.0kb upstream 5.0kb upstream 8512 true Chr19: 719279-727790 Physcomitrium patens
Pp3c19_1630 5.0kb upstream 5.0kb upstream 5000 false Chr19: 719279-724278 Physcomitrium patens
Pp3c19_1630 5.0kb downstream 5.0kb downstream 8512 true Chr19: 724279-732790 Physcomitrium patens
Pp3c19_1630 5.0kb downstream 5.0kb downstream 5000 false Chr19: 727791-732790 Physcomitrium patens
Pp3c19_1630 10.0kb upstream 10.0kb upstream 13512 true Chr19: 714279-727790 Physcomitrium patens
Pp3c19_1630 10.0kb upstream 10.0kb upstream 10000 false Chr19: 714279-724278 Physcomitrium patens
Pp3c19_1630 10.0kb downstream 10.0kb downstream 13512 true Chr19: 724279-737790 Physcomitrium patens
Pp3c19_1630 10.0kb downstream 10.0kb downstream 10000 false Chr19: 727791-737790 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121346697 5274 Embryophyte View MSA
123380430 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.058       High
cufflinks 5.525       High
cufflinks 2.043       Low
cufflinks 2.73        
cufflinks 4.541        
cufflinks 3.627        
cufflinks 4.12        
cufflinks 3.133        
cufflinks 1.96       Low
cufflinks 3.783        
cufflinks 3.475        
cufflinks 1.686       Low
cufflinks 3.997        
cufflinks 1.918       Low
cufflinks 3.11        
cufflinks 2.44        
cufflinks 5.11       High
cufflinks 4.6        
cufflinks 3.833        
cufflinks 4.054        
cufflinks 3.577        
cufflinks 5.024       High
cufflinks 1.927       Low
cufflinks 2.486        
cufflinks 5.28       High
cufflinks 7.448       High
cufflinks 4.105        
cufflinks 2.089       Low
cufflinks 3.516        
cufflinks 2.53        

0 Strain