Gene : Pp3c19_17530 P. patens v3.3
Defline:  (1 of 1) PTHR13260 - ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 CYCLOSOME SUBUNIT 4 Genomic Order:  819
Name:  ? Pp3c19_17530 Secondary Identifier:  ? PAC:32939504
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c19_17530 0.5kb upstream 0.5kb upstream 7224 true Chr19: 11346178-11353401 Physcomitrium patens
Pp3c19_17530 0.5kb upstream 0.5kb upstream 500 false Chr19: 11352902-11353401 Physcomitrium patens
Pp3c19_17530 0.5kb downstream 0.5kb downstream 7224 true Chr19: 11345678-11352901 Physcomitrium patens
Pp3c19_17530 0.5kb downstream 0.5kb downstream 500 false Chr19: 11345678-11346177 Physcomitrium patens
Pp3c19_17530 1.0kb upstream 1.0kb upstream 7724 true Chr19: 11346178-11353901 Physcomitrium patens
Pp3c19_17530 1.0kb upstream 1.0kb upstream 1000 false Chr19: 11352902-11353901 Physcomitrium patens
Pp3c19_17530 1.0kb downstream 1.0kb downstream 7724 true Chr19: 11345178-11352901 Physcomitrium patens
Pp3c19_17530 1.0kb downstream 1.0kb downstream 1000 false Chr19: 11345178-11346177 Physcomitrium patens
Pp3c19_17530 2.0kb upstream 2.0kb upstream 8724 true Chr19: 11346178-11354901 Physcomitrium patens
Pp3c19_17530 2.0kb upstream 2.0kb upstream 2000 false Chr19: 11352902-11354901 Physcomitrium patens
Pp3c19_17530 2.0kb downstream 2.0kb downstream 8724 true Chr19: 11344178-11352901 Physcomitrium patens
Pp3c19_17530 2.0kb downstream 2.0kb downstream 2000 false Chr19: 11344178-11346177 Physcomitrium patens
Pp3c19_17530 5.0kb upstream 5.0kb upstream 11724 true Chr19: 11346178-11357901 Physcomitrium patens
Pp3c19_17530 5.0kb upstream 5.0kb upstream 5000 false Chr19: 11352902-11357901 Physcomitrium patens
Pp3c19_17530 5.0kb downstream 5.0kb downstream 11724 true Chr19: 11341178-11352901 Physcomitrium patens
Pp3c19_17530 5.0kb downstream 5.0kb downstream 5000 false Chr19: 11341178-11346177 Physcomitrium patens
Pp3c19_17530 10.0kb upstream 10.0kb upstream 16724 true Chr19: 11346178-11362901 Physcomitrium patens
Pp3c19_17530 10.0kb upstream 10.0kb upstream 10000 false Chr19: 11352902-11362901 Physcomitrium patens
Pp3c19_17530 10.0kb downstream 10.0kb downstream 16724 true Chr19: 11336178-11352901 Physcomitrium patens
Pp3c19_17530 10.0kb downstream 10.0kb downstream 10000 false Chr19: 11336178-11346177 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345416 5274 Embryophyte View MSA
123423940 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.842        
cufflinks 5.948       Low
cufflinks 9.947        
cufflinks 9.303        
cufflinks 9.925        
cufflinks 2.346       Low
cufflinks 13.892        
cufflinks 11.214        
cufflinks 12.937        
cufflinks 12.843        
cufflinks 2.271       Low
cufflinks 10.251        
cufflinks 5.357       Low
cufflinks 9.77        
cufflinks 9.904        
cufflinks 11.771        
cufflinks 10.583        
cufflinks 9.512        
cufflinks 7.773        
cufflinks 11.206        
cufflinks 14.301        
cufflinks 13.911        
cufflinks 10.714        
cufflinks 14.589       High
cufflinks 9.481        
cufflinks 9.646        
cufflinks 12.119        
cufflinks 10.083        
cufflinks 8.752        
cufflinks 9.154        

0 Strain