Gene : Pp3c19_12629 P. patens v3.3
Genomic Order:  598 Name:  ? Pp3c19_12629
Secondary Identifier:  ? PAC:32938913
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c19_12629 0.5kb upstream 0.5kb upstream 2106 true Chr19: 8314481-8316586 Physcomitrium patens
Pp3c19_12629 0.5kb upstream 0.5kb upstream 500 false Chr19: 8314481-8314980 Physcomitrium patens
Pp3c19_12629 0.5kb downstream 0.5kb downstream 2106 true Chr19: 8314981-8317086 Physcomitrium patens
Pp3c19_12629 0.5kb downstream 0.5kb downstream 500 false Chr19: 8316587-8317086 Physcomitrium patens
Pp3c19_12629 1.0kb upstream 1.0kb upstream 2606 true Chr19: 8313981-8316586 Physcomitrium patens
Pp3c19_12629 1.0kb upstream 1.0kb upstream 1000 false Chr19: 8313981-8314980 Physcomitrium patens
Pp3c19_12629 1.0kb downstream 1.0kb downstream 2606 true Chr19: 8314981-8317586 Physcomitrium patens
Pp3c19_12629 1.0kb downstream 1.0kb downstream 1000 false Chr19: 8316587-8317586 Physcomitrium patens
Pp3c19_12629 2.0kb upstream 2.0kb upstream 3606 true Chr19: 8312981-8316586 Physcomitrium patens
Pp3c19_12629 2.0kb upstream 2.0kb upstream 2000 false Chr19: 8312981-8314980 Physcomitrium patens
Pp3c19_12629 2.0kb downstream 2.0kb downstream 3606 true Chr19: 8314981-8318586 Physcomitrium patens
Pp3c19_12629 2.0kb downstream 2.0kb downstream 2000 false Chr19: 8316587-8318586 Physcomitrium patens
Pp3c19_12629 5.0kb upstream 5.0kb upstream 6606 true Chr19: 8309981-8316586 Physcomitrium patens
Pp3c19_12629 5.0kb upstream 5.0kb upstream 5000 false Chr19: 8309981-8314980 Physcomitrium patens
Pp3c19_12629 5.0kb downstream 5.0kb downstream 6606 true Chr19: 8314981-8321586 Physcomitrium patens
Pp3c19_12629 5.0kb downstream 5.0kb downstream 5000 false Chr19: 8316587-8321586 Physcomitrium patens
Pp3c19_12629 10.0kb upstream 10.0kb upstream 11606 true Chr19: 8304981-8316586 Physcomitrium patens
Pp3c19_12629 10.0kb upstream 10.0kb upstream 10000 false Chr19: 8304981-8314980 Physcomitrium patens
Pp3c19_12629 10.0kb downstream 10.0kb downstream 11606 true Chr19: 8314981-8326586 Physcomitrium patens
Pp3c19_12629 10.0kb downstream 10.0kb downstream 10000 false Chr19: 8316587-8326586 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121330038 5274 Embryophyte Singleton cluster - no MSA
123367020 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low High
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain