Gene : Pp3c19_6530 P. patens v3.3
Defline:  (1 of 3) 2.8.1.11 - Molybdopterin-synthase sulfurtransferase / Molybdopterin synthase sulfurylase Genomic Order:  324
Name:  ? Pp3c19_6530 Secondary Identifier:  ? PAC:32938514
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens PWY-6823 Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c19_6530 0.5kb upstream 0.5kb upstream 3619 true Chr19: 3761906-3765524 Physcomitrium patens
Pp3c19_6530 0.5kb upstream 0.5kb upstream 500 false Chr19: 3761906-3762405 Physcomitrium patens
Pp3c19_6530 0.5kb downstream 0.5kb downstream 3619 true Chr19: 3762406-3766024 Physcomitrium patens
Pp3c19_6530 0.5kb downstream 0.5kb downstream 500 false Chr19: 3765525-3766024 Physcomitrium patens
Pp3c19_6530 1.0kb upstream 1.0kb upstream 4119 true Chr19: 3761406-3765524 Physcomitrium patens
Pp3c19_6530 1.0kb upstream 1.0kb upstream 1000 false Chr19: 3761406-3762405 Physcomitrium patens
Pp3c19_6530 1.0kb downstream 1.0kb downstream 4119 true Chr19: 3762406-3766524 Physcomitrium patens
Pp3c19_6530 1.0kb downstream 1.0kb downstream 1000 false Chr19: 3765525-3766524 Physcomitrium patens
Pp3c19_6530 2.0kb upstream 2.0kb upstream 5119 true Chr19: 3760406-3765524 Physcomitrium patens
Pp3c19_6530 2.0kb upstream 2.0kb upstream 2000 false Chr19: 3760406-3762405 Physcomitrium patens
Pp3c19_6530 2.0kb downstream 2.0kb downstream 5119 true Chr19: 3762406-3767524 Physcomitrium patens
Pp3c19_6530 2.0kb downstream 2.0kb downstream 2000 false Chr19: 3765525-3767524 Physcomitrium patens
Pp3c19_6530 5.0kb upstream 5.0kb upstream 8119 true Chr19: 3757406-3765524 Physcomitrium patens
Pp3c19_6530 5.0kb upstream 5.0kb upstream 5000 false Chr19: 3757406-3762405 Physcomitrium patens
Pp3c19_6530 5.0kb downstream 5.0kb downstream 8119 true Chr19: 3762406-3770524 Physcomitrium patens
Pp3c19_6530 5.0kb downstream 5.0kb downstream 5000 false Chr19: 3765525-3770524 Physcomitrium patens
Pp3c19_6530 10.0kb upstream 10.0kb upstream 13119 true Chr19: 3752406-3765524 Physcomitrium patens
Pp3c19_6530 10.0kb upstream 10.0kb upstream 10000 false Chr19: 3752406-3762405 Physcomitrium patens
Pp3c19_6530 10.0kb downstream 10.0kb downstream 13119 true Chr19: 3762406-3775524 Physcomitrium patens
Pp3c19_6530 10.0kb downstream 10.0kb downstream 10000 false Chr19: 3765525-3775524 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123429008 5275 Viridiplantae View MSA
121346402 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.722        
cufflinks 0.725        
cufflinks 0.775        
cufflinks 0.649        
cufflinks 1.188        
cufflinks 1.191        
cufflinks 0.265       Low
cufflinks 0.66        
cufflinks 0.983        
cufflinks 1.096        
cufflinks 0.894        
cufflinks 0.498       Low
cufflinks 0.309       Low
cufflinks 1.134        
cufflinks 1.168        
cufflinks 1.231        
cufflinks 1.409       High
cufflinks 0.76        
cufflinks 0.304       Low
cufflinks 1.017        
cufflinks 1.23        
cufflinks 0.813        
cufflinks 0.968        
cufflinks 1.048        
cufflinks 1.201        
cufflinks 0.917        
cufflinks 0.935        
cufflinks 0.9        
cufflinks 0.967        
cufflinks 0.696        

0 Strain