Gene : Pp3c21_7940 P. patens v3.3
Genomic Order:  347 Name:  ? Pp3c21_7940
Secondary Identifier:  ? PAC:32915579
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

10 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c21_7940 0.5kb upstream 0.5kb upstream 5189 true Chr21: 5122206-5127394 Physcomitrium patens
Pp3c21_7940 0.5kb upstream 0.5kb upstream 500 false Chr21: 5122206-5122705 Physcomitrium patens
Pp3c21_7940 0.5kb downstream 0.5kb downstream 5189 true Chr21: 5122706-5127894 Physcomitrium patens
Pp3c21_7940 0.5kb downstream 0.5kb downstream 500 false Chr21: 5127395-5127894 Physcomitrium patens
Pp3c21_7940 1.0kb upstream 1.0kb upstream 5689 true Chr21: 5121706-5127394 Physcomitrium patens
Pp3c21_7940 1.0kb upstream 1.0kb upstream 1000 false Chr21: 5121706-5122705 Physcomitrium patens
Pp3c21_7940 1.0kb downstream 1.0kb downstream 5689 true Chr21: 5122706-5128394 Physcomitrium patens
Pp3c21_7940 1.0kb downstream 1.0kb downstream 1000 false Chr21: 5127395-5128394 Physcomitrium patens
Pp3c21_7940 2.0kb upstream 2.0kb upstream 6689 true Chr21: 5120706-5127394 Physcomitrium patens
Pp3c21_7940 2.0kb upstream 2.0kb upstream 2000 false Chr21: 5120706-5122705 Physcomitrium patens
Pp3c21_7940 2.0kb downstream 2.0kb downstream 6689 true Chr21: 5122706-5129394 Physcomitrium patens
Pp3c21_7940 2.0kb downstream 2.0kb downstream 2000 false Chr21: 5127395-5129394 Physcomitrium patens
Pp3c21_7940 5.0kb upstream 5.0kb upstream 9689 true Chr21: 5117706-5127394 Physcomitrium patens
Pp3c21_7940 5.0kb upstream 5.0kb upstream 5000 false Chr21: 5117706-5122705 Physcomitrium patens
Pp3c21_7940 5.0kb downstream 5.0kb downstream 9689 true Chr21: 5122706-5132394 Physcomitrium patens
Pp3c21_7940 5.0kb downstream 5.0kb downstream 5000 false Chr21: 5127395-5132394 Physcomitrium patens
Pp3c21_7940 10.0kb upstream 10.0kb upstream 14689 true Chr21: 5112706-5127394 Physcomitrium patens
Pp3c21_7940 10.0kb upstream 10.0kb upstream 10000 false Chr21: 5112706-5122705 Physcomitrium patens
Pp3c21_7940 10.0kb downstream 10.0kb downstream 14689 true Chr21: 5122706-5137394 Physcomitrium patens
Pp3c21_7940 10.0kb downstream 10.0kb downstream 10000 false Chr21: 5127395-5137394 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121347795 5274 Embryophyte View MSA
123426242 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.275     High  
cufflinks 123.564     High  
cufflinks 66.393     High  
cufflinks 45.131     High  
cufflinks 111.711     High  
cufflinks 49.628     High  
cufflinks 187.728     High High
cufflinks 165.415     High High
cufflinks 52.242     High  
cufflinks 184.859     High High
cufflinks 115.926     High  
cufflinks 58.629     High  
cufflinks 119.731     High  
cufflinks 87.508     High  
cufflinks 71.932     High  
cufflinks 151.804     High  
cufflinks 197.814     High High
cufflinks 96.678     High  
cufflinks 84.856     High  
cufflinks 31.222     High Low
cufflinks 92.787     High  
cufflinks 115.872     High  
cufflinks 99.991     High  
cufflinks 100.548     High  
cufflinks 87.657     High  
cufflinks 160.529     High  
cufflinks 154.288     High  
cufflinks 16.268       Low
cufflinks 60.14     High  
cufflinks 13.905       Low

0 Strain