Gene : Pp3c21_5360 P. patens v3.3
Defline:  (1 of 1) PF08192 - Peptidase family S64 (Peptidase_S64) Genomic Order:  232
Name:  ? Pp3c21_5360 Secondary Identifier:  ? PAC:32916374
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c21_5360 0.5kb upstream 0.5kb upstream 5435 true Chr21: 3373614-3379048 Physcomitrium patens
Pp3c21_5360 0.5kb upstream 0.5kb upstream 500 false Chr21: 3378549-3379048 Physcomitrium patens
Pp3c21_5360 0.5kb downstream 0.5kb downstream 5435 true Chr21: 3373114-3378548 Physcomitrium patens
Pp3c21_5360 0.5kb downstream 0.5kb downstream 500 false Chr21: 3373114-3373613 Physcomitrium patens
Pp3c21_5360 1.0kb upstream 1.0kb upstream 5935 true Chr21: 3373614-3379548 Physcomitrium patens
Pp3c21_5360 1.0kb upstream 1.0kb upstream 1000 false Chr21: 3378549-3379548 Physcomitrium patens
Pp3c21_5360 1.0kb downstream 1.0kb downstream 5935 true Chr21: 3372614-3378548 Physcomitrium patens
Pp3c21_5360 1.0kb downstream 1.0kb downstream 1000 false Chr21: 3372614-3373613 Physcomitrium patens
Pp3c21_5360 2.0kb upstream 2.0kb upstream 6935 true Chr21: 3373614-3380548 Physcomitrium patens
Pp3c21_5360 2.0kb upstream 2.0kb upstream 2000 false Chr21: 3378549-3380548 Physcomitrium patens
Pp3c21_5360 2.0kb downstream 2.0kb downstream 6935 true Chr21: 3371614-3378548 Physcomitrium patens
Pp3c21_5360 2.0kb downstream 2.0kb downstream 2000 false Chr21: 3371614-3373613 Physcomitrium patens
Pp3c21_5360 5.0kb upstream 5.0kb upstream 9935 true Chr21: 3373614-3383548 Physcomitrium patens
Pp3c21_5360 5.0kb upstream 5.0kb upstream 5000 false Chr21: 3378549-3383548 Physcomitrium patens
Pp3c21_5360 5.0kb downstream 5.0kb downstream 9935 true Chr21: 3368614-3378548 Physcomitrium patens
Pp3c21_5360 5.0kb downstream 5.0kb downstream 5000 false Chr21: 3368614-3373613 Physcomitrium patens
Pp3c21_5360 10.0kb upstream 10.0kb upstream 14935 true Chr21: 3373614-3388548 Physcomitrium patens
Pp3c21_5360 10.0kb upstream 10.0kb upstream 10000 false Chr21: 3378549-3388548 Physcomitrium patens
Pp3c21_5360 10.0kb downstream 10.0kb downstream 14935 true Chr21: 3363614-3378548 Physcomitrium patens
Pp3c21_5360 10.0kb downstream 10.0kb downstream 10000 false Chr21: 3363614-3373613 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345558 5274 Embryophyte View MSA
123380236 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 114.952     High Low
cufflinks 273.076     High  
cufflinks 305.87     High  
cufflinks 459.05     High High
cufflinks 434.596     High High
cufflinks 267.012     High  
cufflinks 173.577     High  
cufflinks 399.073     High  
cufflinks 375.64     High  
cufflinks 271.501     High  
cufflinks 300.307     High  
cufflinks 315.75     High  
cufflinks 183.872     High  
cufflinks 253.551     High  
cufflinks 284.997     High  
cufflinks 198.66     High  
cufflinks 98.175     High Low
cufflinks 424.008     High High
cufflinks 207.853     High  
cufflinks 266.609     High  
cufflinks 331.493     High  
cufflinks 120.544     High Low
cufflinks 384.133     High  
cufflinks 681.601     High High
cufflinks 128.049     High Low
cufflinks 199.893     High  
cufflinks 352.585     High  
cufflinks 318.478     High  
cufflinks 189.38     High  
cufflinks 168.358     High  

0 Strain