Gene : Pp3c22_3310 P. patens v3.3
Defline:  (1 of 1) PTHR23115:SF69 - PEPTIDE CHAIN RELEASE FACTOR 3 Genomic Order:  155
Name:  ? Pp3c22_3310 Secondary Identifier:  ? PAC:32903118
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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10 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c22_3310 0.5kb upstream 0.5kb upstream 6458 true Chr22: 2183097-2189554 Physcomitrium patens
Pp3c22_3310 0.5kb upstream 0.5kb upstream 500 false Chr22: 2189055-2189554 Physcomitrium patens
Pp3c22_3310 0.5kb downstream 0.5kb downstream 6458 true Chr22: 2182597-2189054 Physcomitrium patens
Pp3c22_3310 0.5kb downstream 0.5kb downstream 500 false Chr22: 2182597-2183096 Physcomitrium patens
Pp3c22_3310 1.0kb upstream 1.0kb upstream 6958 true Chr22: 2183097-2190054 Physcomitrium patens
Pp3c22_3310 1.0kb upstream 1.0kb upstream 1000 false Chr22: 2189055-2190054 Physcomitrium patens
Pp3c22_3310 1.0kb downstream 1.0kb downstream 6958 true Chr22: 2182097-2189054 Physcomitrium patens
Pp3c22_3310 1.0kb downstream 1.0kb downstream 1000 false Chr22: 2182097-2183096 Physcomitrium patens
Pp3c22_3310 2.0kb upstream 2.0kb upstream 7958 true Chr22: 2183097-2191054 Physcomitrium patens
Pp3c22_3310 2.0kb upstream 2.0kb upstream 2000 false Chr22: 2189055-2191054 Physcomitrium patens
Pp3c22_3310 2.0kb downstream 2.0kb downstream 7958 true Chr22: 2181097-2189054 Physcomitrium patens
Pp3c22_3310 2.0kb downstream 2.0kb downstream 2000 false Chr22: 2181097-2183096 Physcomitrium patens
Pp3c22_3310 5.0kb upstream 5.0kb upstream 10958 true Chr22: 2183097-2194054 Physcomitrium patens
Pp3c22_3310 5.0kb upstream 5.0kb upstream 5000 false Chr22: 2189055-2194054 Physcomitrium patens
Pp3c22_3310 5.0kb downstream 5.0kb downstream 10958 true Chr22: 2178097-2189054 Physcomitrium patens
Pp3c22_3310 5.0kb downstream 5.0kb downstream 5000 false Chr22: 2178097-2183096 Physcomitrium patens
Pp3c22_3310 10.0kb upstream 10.0kb upstream 15958 true Chr22: 2183097-2199054 Physcomitrium patens
Pp3c22_3310 10.0kb upstream 10.0kb upstream 10000 false Chr22: 2189055-2199054 Physcomitrium patens
Pp3c22_3310 10.0kb downstream 10.0kb downstream 15958 true Chr22: 2173097-2189054 Physcomitrium patens
Pp3c22_3310 10.0kb downstream 10.0kb downstream 10000 false Chr22: 2173097-2183096 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343241 5274 Embryophyte View MSA
123427273 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.185     High High
cufflinks 9.378        
cufflinks 4.436        
cufflinks 5.462        
cufflinks 9.304        
cufflinks 2.376        
cufflinks 4.315        
cufflinks 4.641        
cufflinks 6.165        
cufflinks 7.456        
cufflinks 9.777        
cufflinks 6.245        
cufflinks 7.654        
cufflinks 0.823       Low
cufflinks 3.12        
cufflinks 4.711        
cufflinks 2.714        
cufflinks 6.502        
cufflinks 8.63        
cufflinks 11.944       High
cufflinks 4.429        
cufflinks 2.458        
cufflinks 1.293       Low
cufflinks 9.625        
cufflinks 3.368        
cufflinks 9.23        
cufflinks 3.367        
cufflinks 6.045        
cufflinks 0.791       Low
cufflinks 2.871        

0 Strain