Gene : Pp3c22_21030 P. patens v3.3
Defline:  (1 of 1) PTHR23389:SF10 - REPLICATION FACTOR C SUBUNIT 1 Genomic Order:  905
Name:  ? Pp3c22_21030 Secondary Identifier:  ? PAC:32905160
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c22_21030 0.5kb upstream 0.5kb upstream 9959 true Chr22: 14086657-14096615 Physcomitrium patens
Pp3c22_21030 0.5kb upstream 0.5kb upstream 500 false Chr22: 14086657-14087156 Physcomitrium patens
Pp3c22_21030 0.5kb downstream 0.5kb downstream 9959 true Chr22: 14087157-14097115 Physcomitrium patens
Pp3c22_21030 0.5kb downstream 0.5kb downstream 500 false Chr22: 14096616-14097115 Physcomitrium patens
Pp3c22_21030 1.0kb upstream 1.0kb upstream 10459 true Chr22: 14086157-14096615 Physcomitrium patens
Pp3c22_21030 1.0kb upstream 1.0kb upstream 1000 false Chr22: 14086157-14087156 Physcomitrium patens
Pp3c22_21030 1.0kb downstream 1.0kb downstream 10459 true Chr22: 14087157-14097615 Physcomitrium patens
Pp3c22_21030 1.0kb downstream 1.0kb downstream 1000 false Chr22: 14096616-14097615 Physcomitrium patens
Pp3c22_21030 2.0kb upstream 2.0kb upstream 11459 true Chr22: 14085157-14096615 Physcomitrium patens
Pp3c22_21030 2.0kb upstream 2.0kb upstream 2000 false Chr22: 14085157-14087156 Physcomitrium patens
Pp3c22_21030 2.0kb downstream 2.0kb downstream 11459 true Chr22: 14087157-14098615 Physcomitrium patens
Pp3c22_21030 2.0kb downstream 2.0kb downstream 2000 false Chr22: 14096616-14098615 Physcomitrium patens
Pp3c22_21030 5.0kb upstream 5.0kb upstream 14459 true Chr22: 14082157-14096615 Physcomitrium patens
Pp3c22_21030 5.0kb upstream 5.0kb upstream 5000 false Chr22: 14082157-14087156 Physcomitrium patens
Pp3c22_21030 5.0kb downstream 5.0kb downstream 14459 true Chr22: 14087157-14101615 Physcomitrium patens
Pp3c22_21030 5.0kb downstream 5.0kb downstream 5000 false Chr22: 14096616-14101615 Physcomitrium patens
Pp3c22_21030 10.0kb upstream 10.0kb upstream 19459 true Chr22: 14077157-14096615 Physcomitrium patens
Pp3c22_21030 10.0kb upstream 10.0kb upstream 10000 false Chr22: 14077157-14087156 Physcomitrium patens
Pp3c22_21030 10.0kb downstream 10.0kb downstream 19459 true Chr22: 14087157-14106615 Physcomitrium patens
Pp3c22_21030 10.0kb downstream 10.0kb downstream 10000 false Chr22: 14096616-14106615 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345302 5274 Embryophyte View MSA
123425414 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 183.861     High  
cufflinks 101.982     High  
cufflinks 26.458     High Low
cufflinks 275.797     High High
cufflinks 103.817     High  
cufflinks 143.93     High  
cufflinks 162.685     High  
cufflinks 181.161     High  
cufflinks 206.821     High  
cufflinks 126.204     High  
cufflinks 257.893     High High
cufflinks 39.868     High Low
cufflinks 86.965     High  
cufflinks 37.276     High Low
cufflinks 185.15     High  
cufflinks 130.115     High  
cufflinks 288.264     High High
cufflinks 188.363     High  
cufflinks 233.749     High  
cufflinks 146.004     High  
cufflinks 267.093     High High
cufflinks 125.192     High  
cufflinks 191.86     High  
cufflinks 227.195     High  
cufflinks 122.953     High  
cufflinks 137.613     High  
cufflinks 162.478     High  
cufflinks 264.841     High High
cufflinks 112.764     High  
cufflinks 87.686     High  

0 Strain