Gene : Pp3c22_11190 P. patens v3.3
Defline:  (1 of 5) KOG3276 - Uncharacterized conserved protein, contains YggU domain Genomic Order:  521
Name:  ? Pp3c22_11190 Secondary Identifier:  ? PAC:32905054
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c22_11190 0.5kb upstream 0.5kb upstream 3775 true Chr22: 7086242-7090016 Physcomitrium patens
Pp3c22_11190 0.5kb upstream 0.5kb upstream 500 false Chr22: 7089517-7090016 Physcomitrium patens
Pp3c22_11190 0.5kb downstream 0.5kb downstream 3775 true Chr22: 7085742-7089516 Physcomitrium patens
Pp3c22_11190 0.5kb downstream 0.5kb downstream 500 false Chr22: 7085742-7086241 Physcomitrium patens
Pp3c22_11190 1.0kb upstream 1.0kb upstream 4275 true Chr22: 7086242-7090516 Physcomitrium patens
Pp3c22_11190 1.0kb upstream 1.0kb upstream 1000 false Chr22: 7089517-7090516 Physcomitrium patens
Pp3c22_11190 1.0kb downstream 1.0kb downstream 4275 true Chr22: 7085242-7089516 Physcomitrium patens
Pp3c22_11190 1.0kb downstream 1.0kb downstream 1000 false Chr22: 7085242-7086241 Physcomitrium patens
Pp3c22_11190 2.0kb upstream 2.0kb upstream 5275 true Chr22: 7086242-7091516 Physcomitrium patens
Pp3c22_11190 2.0kb upstream 2.0kb upstream 2000 false Chr22: 7089517-7091516 Physcomitrium patens
Pp3c22_11190 2.0kb downstream 2.0kb downstream 5275 true Chr22: 7084242-7089516 Physcomitrium patens
Pp3c22_11190 2.0kb downstream 2.0kb downstream 2000 false Chr22: 7084242-7086241 Physcomitrium patens
Pp3c22_11190 5.0kb upstream 5.0kb upstream 8275 true Chr22: 7086242-7094516 Physcomitrium patens
Pp3c22_11190 5.0kb upstream 5.0kb upstream 5000 false Chr22: 7089517-7094516 Physcomitrium patens
Pp3c22_11190 5.0kb downstream 5.0kb downstream 8275 true Chr22: 7081242-7089516 Physcomitrium patens
Pp3c22_11190 5.0kb downstream 5.0kb downstream 5000 false Chr22: 7081242-7086241 Physcomitrium patens
Pp3c22_11190 10.0kb upstream 10.0kb upstream 13275 true Chr22: 7086242-7099516 Physcomitrium patens
Pp3c22_11190 10.0kb upstream 10.0kb upstream 10000 false Chr22: 7089517-7099516 Physcomitrium patens
Pp3c22_11190 10.0kb downstream 10.0kb downstream 13275 true Chr22: 7076242-7089516 Physcomitrium patens
Pp3c22_11190 10.0kb downstream 10.0kb downstream 10000 false Chr22: 7076242-7086241 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344013 5274 Embryophyte View MSA
123423948 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain