Gene : Pp3c22_2990 P. patens v3.3
Defline:  (1 of 2) 2.4.1.83 - Dolichyl-phosphate beta-D-mannosyltransferase / Mannosylphosphoryldolichol synthase Genomic Order:  137
Name:  ? Pp3c22_2990 Secondary Identifier:  ? PAC:32903475
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

11 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c22_2990 0.5kb upstream 0.5kb upstream 2298 true Chr22: 2018372-2020669 Physcomitrium patens
Pp3c22_2990 0.5kb upstream 0.5kb upstream 500 false Chr22: 2020170-2020669 Physcomitrium patens
Pp3c22_2990 0.5kb downstream 0.5kb downstream 2298 true Chr22: 2017872-2020169 Physcomitrium patens
Pp3c22_2990 0.5kb downstream 0.5kb downstream 500 false Chr22: 2017872-2018371 Physcomitrium patens
Pp3c22_2990 1.0kb upstream 1.0kb upstream 2798 true Chr22: 2018372-2021169 Physcomitrium patens
Pp3c22_2990 1.0kb upstream 1.0kb upstream 1000 false Chr22: 2020170-2021169 Physcomitrium patens
Pp3c22_2990 1.0kb downstream 1.0kb downstream 2798 true Chr22: 2017372-2020169 Physcomitrium patens
Pp3c22_2990 1.0kb downstream 1.0kb downstream 1000 false Chr22: 2017372-2018371 Physcomitrium patens
Pp3c22_2990 2.0kb upstream 2.0kb upstream 3798 true Chr22: 2018372-2022169 Physcomitrium patens
Pp3c22_2990 2.0kb upstream 2.0kb upstream 2000 false Chr22: 2020170-2022169 Physcomitrium patens
Pp3c22_2990 2.0kb downstream 2.0kb downstream 3798 true Chr22: 2016372-2020169 Physcomitrium patens
Pp3c22_2990 2.0kb downstream 2.0kb downstream 2000 false Chr22: 2016372-2018371 Physcomitrium patens
Pp3c22_2990 5.0kb upstream 5.0kb upstream 6798 true Chr22: 2018372-2025169 Physcomitrium patens
Pp3c22_2990 5.0kb upstream 5.0kb upstream 5000 false Chr22: 2020170-2025169 Physcomitrium patens
Pp3c22_2990 5.0kb downstream 5.0kb downstream 6798 true Chr22: 2013372-2020169 Physcomitrium patens
Pp3c22_2990 5.0kb downstream 5.0kb downstream 5000 false Chr22: 2013372-2018371 Physcomitrium patens
Pp3c22_2990 10.0kb upstream 10.0kb upstream 11798 true Chr22: 2018372-2030169 Physcomitrium patens
Pp3c22_2990 10.0kb upstream 10.0kb upstream 10000 false Chr22: 2020170-2030169 Physcomitrium patens
Pp3c22_2990 10.0kb downstream 10.0kb downstream 11798 true Chr22: 2008372-2020169 Physcomitrium patens
Pp3c22_2990 10.0kb downstream 10.0kb downstream 10000 false Chr22: 2008372-2018371 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121349039 5274 Embryophyte View MSA
123381135 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.65       High
cufflinks 1.907        
cufflinks 2.987       High
cufflinks 2.221        
cufflinks 2.017        
cufflinks 1.85        
cufflinks 0.846       Low
cufflinks 2.381        
cufflinks 1.004       Low
cufflinks 1.976        
cufflinks 1.526        
cufflinks 0.749       Low
cufflinks 1.674        
cufflinks 0.972       Low
cufflinks 2.816       High
cufflinks 2.121        
cufflinks 2.064        
cufflinks 1.232        
cufflinks 1.521        
cufflinks 2.354        
cufflinks 3.524       High
cufflinks 1.956        
cufflinks 2.321        
cufflinks 1.742        
cufflinks 1.197        
cufflinks 0.991       Low
cufflinks 1.332        
cufflinks 2.043        
cufflinks 1.476        
cufflinks 2.058        

0 Strain