Gene : Pp3c23_15560 P. patens v3.3
Defline:  (1 of 2) 2.7.1.16 - Ribulokinase / L-ribulokinase Genomic Order:  684
Name:  ? Pp3c23_15560 Secondary Identifier:  ? PAC:32951033
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c23_15560 0.5kb upstream 0.5kb upstream 7224 true Chr23: 10380181-10387404 Physcomitrium patens
Pp3c23_15560 0.5kb upstream 0.5kb upstream 500 false Chr23: 10380181-10380680 Physcomitrium patens
Pp3c23_15560 0.5kb downstream 0.5kb downstream 7224 true Chr23: 10380681-10387904 Physcomitrium patens
Pp3c23_15560 0.5kb downstream 0.5kb downstream 500 false Chr23: 10387405-10387904 Physcomitrium patens
Pp3c23_15560 1.0kb upstream 1.0kb upstream 7724 true Chr23: 10379681-10387404 Physcomitrium patens
Pp3c23_15560 1.0kb upstream 1.0kb upstream 1000 false Chr23: 10379681-10380680 Physcomitrium patens
Pp3c23_15560 1.0kb downstream 1.0kb downstream 7724 true Chr23: 10380681-10388404 Physcomitrium patens
Pp3c23_15560 1.0kb downstream 1.0kb downstream 1000 false Chr23: 10387405-10388404 Physcomitrium patens
Pp3c23_15560 2.0kb upstream 2.0kb upstream 8724 true Chr23: 10378681-10387404 Physcomitrium patens
Pp3c23_15560 2.0kb upstream 2.0kb upstream 2000 false Chr23: 10378681-10380680 Physcomitrium patens
Pp3c23_15560 2.0kb downstream 2.0kb downstream 8724 true Chr23: 10380681-10389404 Physcomitrium patens
Pp3c23_15560 2.0kb downstream 2.0kb downstream 2000 false Chr23: 10387405-10389404 Physcomitrium patens
Pp3c23_15560 5.0kb upstream 5.0kb upstream 11724 true Chr23: 10375681-10387404 Physcomitrium patens
Pp3c23_15560 5.0kb upstream 5.0kb upstream 5000 false Chr23: 10375681-10380680 Physcomitrium patens
Pp3c23_15560 5.0kb downstream 5.0kb downstream 11724 true Chr23: 10380681-10392404 Physcomitrium patens
Pp3c23_15560 5.0kb downstream 5.0kb downstream 5000 false Chr23: 10387405-10392404 Physcomitrium patens
Pp3c23_15560 10.0kb upstream 10.0kb upstream 16724 true Chr23: 10370681-10387404 Physcomitrium patens
Pp3c23_15560 10.0kb upstream 10.0kb upstream 10000 false Chr23: 10370681-10380680 Physcomitrium patens
Pp3c23_15560 10.0kb downstream 10.0kb downstream 16724 true Chr23: 10380681-10397404 Physcomitrium patens
Pp3c23_15560 10.0kb downstream 10.0kb downstream 10000 false Chr23: 10387405-10397404 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121349979 5274 Embryophyte View MSA
123427238 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.507       Low
cufflinks 1.011        
cufflinks 1.25       High
cufflinks 0.968        
cufflinks 0.616       Low
cufflinks 0.625       Low
cufflinks 1.3       High
cufflinks 0.81        
cufflinks 0.804        
cufflinks 1.284       High
cufflinks 0.99        
cufflinks 1.538       High
cufflinks 1.176        
cufflinks 0.966        
cufflinks 1.068        
cufflinks 0.813        
cufflinks 0.944        
cufflinks 0.578       Low
cufflinks 0.807        
cufflinks 0.649       Low
cufflinks 1.608       High
cufflinks 0.968        
cufflinks 0.797        
cufflinks 1.027        
cufflinks 1.339       High
cufflinks 0.672       Low
cufflinks 0.894        
cufflinks 0.816        
cufflinks 1.126        
cufflinks 0.901        

0 Strain