Gene : Pp3c23_21270 P. patens v3.3
Defline:  (1 of 2) PTHR13779:SF7 - ATPASE WRNIP1 Genomic Order:  934
Name:  ? Pp3c23_21270 Secondary Identifier:  ? PAC:32950635
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c23_21270 0.5kb upstream 0.5kb upstream 5947 true Chr23: 14098800-14104746 Physcomitrium patens
Pp3c23_21270 0.5kb upstream 0.5kb upstream 500 false Chr23: 14104247-14104746 Physcomitrium patens
Pp3c23_21270 0.5kb downstream 0.5kb downstream 5947 true Chr23: 14098300-14104246 Physcomitrium patens
Pp3c23_21270 0.5kb downstream 0.5kb downstream 500 false Chr23: 14098300-14098799 Physcomitrium patens
Pp3c23_21270 1.0kb upstream 1.0kb upstream 6447 true Chr23: 14098800-14105246 Physcomitrium patens
Pp3c23_21270 1.0kb upstream 1.0kb upstream 1000 false Chr23: 14104247-14105246 Physcomitrium patens
Pp3c23_21270 1.0kb downstream 1.0kb downstream 6447 true Chr23: 14097800-14104246 Physcomitrium patens
Pp3c23_21270 1.0kb downstream 1.0kb downstream 1000 false Chr23: 14097800-14098799 Physcomitrium patens
Pp3c23_21270 2.0kb upstream 2.0kb upstream 7447 true Chr23: 14098800-14106246 Physcomitrium patens
Pp3c23_21270 2.0kb upstream 2.0kb upstream 2000 false Chr23: 14104247-14106246 Physcomitrium patens
Pp3c23_21270 2.0kb downstream 2.0kb downstream 7447 true Chr23: 14096800-14104246 Physcomitrium patens
Pp3c23_21270 2.0kb downstream 2.0kb downstream 2000 false Chr23: 14096800-14098799 Physcomitrium patens
Pp3c23_21270 5.0kb upstream 5.0kb upstream 10447 true Chr23: 14098800-14109246 Physcomitrium patens
Pp3c23_21270 5.0kb upstream 5.0kb upstream 5000 false Chr23: 14104247-14109246 Physcomitrium patens
Pp3c23_21270 5.0kb downstream 5.0kb downstream 10447 true Chr23: 14093800-14104246 Physcomitrium patens
Pp3c23_21270 5.0kb downstream 5.0kb downstream 5000 false Chr23: 14093800-14098799 Physcomitrium patens
Pp3c23_21270 10.0kb upstream 10.0kb upstream 15447 true Chr23: 14098800-14114246 Physcomitrium patens
Pp3c23_21270 10.0kb upstream 10.0kb upstream 10000 false Chr23: 14104247-14114246 Physcomitrium patens
Pp3c23_21270 10.0kb downstream 10.0kb downstream 15447 true Chr23: 14088800-14104246 Physcomitrium patens
Pp3c23_21270 10.0kb downstream 10.0kb downstream 10000 false Chr23: 14088800-14098799 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121350619 5274 Embryophyte View MSA
123381819 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.307     High High
cufflinks 10.544        
cufflinks 20.255        
cufflinks 11.665        
cufflinks 17.022        
cufflinks 8.481        
cufflinks 6.668        
cufflinks 11.778        
cufflinks 37.557     High High
cufflinks 8.293        
cufflinks 14.464        
cufflinks 17.558        
cufflinks 29.164     High High
cufflinks 23.602     High High
cufflinks 17.079        
cufflinks 14.375        
cufflinks 11.537        
cufflinks 6.204       Low
cufflinks 2.392       Low
cufflinks 10.103        
cufflinks 13.671        
cufflinks 36.408     High High
cufflinks 17.184        
cufflinks 2.271       Low
cufflinks 14.093        
cufflinks 7.004        
cufflinks 18.824        
cufflinks 12.086        
cufflinks 5.73       Low
cufflinks 8.918        

0 Strain