Gene : Pp3c23_4150 P. patens v3.3
Defline:  (1 of 26) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  148
Name:  ? Pp3c23_4150 Secondary Identifier:  ? PAC:32950648
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c23_4150 0.5kb upstream 0.5kb upstream 4764 true Chr23: 2707819-2712582 Physcomitrium patens
Pp3c23_4150 0.5kb upstream 0.5kb upstream 500 false Chr23: 2712083-2712582 Physcomitrium patens
Pp3c23_4150 0.5kb downstream 0.5kb downstream 4764 true Chr23: 2707319-2712082 Physcomitrium patens
Pp3c23_4150 0.5kb downstream 0.5kb downstream 500 false Chr23: 2707319-2707818 Physcomitrium patens
Pp3c23_4150 1.0kb upstream 1.0kb upstream 5264 true Chr23: 2707819-2713082 Physcomitrium patens
Pp3c23_4150 1.0kb upstream 1.0kb upstream 1000 false Chr23: 2712083-2713082 Physcomitrium patens
Pp3c23_4150 1.0kb downstream 1.0kb downstream 5264 true Chr23: 2706819-2712082 Physcomitrium patens
Pp3c23_4150 1.0kb downstream 1.0kb downstream 1000 false Chr23: 2706819-2707818 Physcomitrium patens
Pp3c23_4150 2.0kb upstream 2.0kb upstream 6264 true Chr23: 2707819-2714082 Physcomitrium patens
Pp3c23_4150 2.0kb upstream 2.0kb upstream 2000 false Chr23: 2712083-2714082 Physcomitrium patens
Pp3c23_4150 2.0kb downstream 2.0kb downstream 6264 true Chr23: 2705819-2712082 Physcomitrium patens
Pp3c23_4150 2.0kb downstream 2.0kb downstream 2000 false Chr23: 2705819-2707818 Physcomitrium patens
Pp3c23_4150 5.0kb upstream 5.0kb upstream 9264 true Chr23: 2707819-2717082 Physcomitrium patens
Pp3c23_4150 5.0kb upstream 5.0kb upstream 5000 false Chr23: 2712083-2717082 Physcomitrium patens
Pp3c23_4150 5.0kb downstream 5.0kb downstream 9264 true Chr23: 2702819-2712082 Physcomitrium patens
Pp3c23_4150 5.0kb downstream 5.0kb downstream 5000 false Chr23: 2702819-2707818 Physcomitrium patens
Pp3c23_4150 10.0kb upstream 10.0kb upstream 14264 true Chr23: 2707819-2722082 Physcomitrium patens
Pp3c23_4150 10.0kb upstream 10.0kb upstream 10000 false Chr23: 2712083-2722082 Physcomitrium patens
Pp3c23_4150 10.0kb downstream 10.0kb downstream 14264 true Chr23: 2697819-2712082 Physcomitrium patens
Pp3c23_4150 10.0kb downstream 10.0kb downstream 10000 false Chr23: 2697819-2707818 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343550 5274 Embryophyte View MSA
123379756 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.308        
cufflinks 0.79        
cufflinks 0.431        
cufflinks 1.592        
cufflinks 1.567        
cufflinks 0.449        
cufflinks 0.34        
cufflinks 1.075        
cufflinks 1.251        
cufflinks 1.241        
cufflinks 0.956        
cufflinks 0.879        
cufflinks 0.889        
cufflinks 0.583        
cufflinks 0.752        
cufflinks 0.587        
cufflinks 1.035        
cufflinks 0.123       Low
cufflinks 1.011        
cufflinks 0.013     Low Low
cufflinks 1.334        
cufflinks 0.912        
cufflinks 1.642        
cufflinks 0.198        
cufflinks 0.062     Low Low
cufflinks 0.007     Low Low
cufflinks 0.645        
cufflinks 0.055     Low Low
cufflinks 0.648        
cufflinks 0.818        

0 Strain