Gene : Pp3c23_900 P. patens v3.3
Defline:  (1 of 1) 4.2.1.55 - 3-hydroxybutyryl-CoA dehydratase / Crotonase Genomic Order:  33
Name:  ? Pp3c23_900 Secondary Identifier:  ? PAC:32948670
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c23_900 0.5kb upstream 0.5kb upstream 3266 true Chr23: 494741-498006 Physcomitrium patens
Pp3c23_900 0.5kb upstream 0.5kb upstream 500 false Chr23: 494741-495240 Physcomitrium patens
Pp3c23_900 0.5kb downstream 0.5kb downstream 3266 true Chr23: 495241-498506 Physcomitrium patens
Pp3c23_900 0.5kb downstream 0.5kb downstream 500 false Chr23: 498007-498506 Physcomitrium patens
Pp3c23_900 1.0kb upstream 1.0kb upstream 3766 true Chr23: 494241-498006 Physcomitrium patens
Pp3c23_900 1.0kb upstream 1.0kb upstream 1000 false Chr23: 494241-495240 Physcomitrium patens
Pp3c23_900 1.0kb downstream 1.0kb downstream 3766 true Chr23: 495241-499006 Physcomitrium patens
Pp3c23_900 1.0kb downstream 1.0kb downstream 1000 false Chr23: 498007-499006 Physcomitrium patens
Pp3c23_900 2.0kb upstream 2.0kb upstream 4766 true Chr23: 493241-498006 Physcomitrium patens
Pp3c23_900 2.0kb upstream 2.0kb upstream 2000 false Chr23: 493241-495240 Physcomitrium patens
Pp3c23_900 2.0kb downstream 2.0kb downstream 4766 true Chr23: 495241-500006 Physcomitrium patens
Pp3c23_900 2.0kb downstream 2.0kb downstream 2000 false Chr23: 498007-500006 Physcomitrium patens
Pp3c23_900 5.0kb upstream 5.0kb upstream 7766 true Chr23: 490241-498006 Physcomitrium patens
Pp3c23_900 5.0kb upstream 5.0kb upstream 5000 false Chr23: 490241-495240 Physcomitrium patens
Pp3c23_900 5.0kb downstream 5.0kb downstream 7766 true Chr23: 495241-503006 Physcomitrium patens
Pp3c23_900 5.0kb downstream 5.0kb downstream 5000 false Chr23: 498007-503006 Physcomitrium patens
Pp3c23_900 10.0kb upstream 10.0kb upstream 12766 true Chr23: 485241-498006 Physcomitrium patens
Pp3c23_900 10.0kb upstream 10.0kb upstream 10000 false Chr23: 485241-495240 Physcomitrium patens
Pp3c23_900 10.0kb downstream 10.0kb downstream 12766 true Chr23: 495241-508006 Physcomitrium patens
Pp3c23_900 10.0kb downstream 10.0kb downstream 10000 false Chr23: 498007-508006 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344921 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.128        
cufflinks 0.161        
cufflinks 0.081     Low  
cufflinks 0.172        
cufflinks 0.042     Low  
cufflinks 0.094     Low  
cufflinks 0.074     Low  
cufflinks 0.612        
cufflinks 0.119        
cufflinks 0.222        
cufflinks 0.244        
cufflinks 0.176        
cufflinks 0.308        
cufflinks 0.28        
cufflinks 0.242        
cufflinks 221.373     High High
cufflinks 0.044     Low  
cufflinks 0.292        
cufflinks 0.168        
cufflinks 0.391        
cufflinks 0.223        
cufflinks 0.073     Low  
cufflinks 0.398        
cufflinks 0.724        
cufflinks 0.181        
cufflinks 0.044     Low  
cufflinks 0.379        
cufflinks 0.164        
cufflinks 0.125        
cufflinks 0.025     Low Low

0 Strain