Gene : Pp3c23_22030 P. patens v3.3
Genomic Order:  979 Name:  ? Pp3c23_22030
Secondary Identifier:  ? PAC:32950936
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c23_22030 0.5kb upstream 0.5kb upstream 2325 true Chr23: 14537780-14540104 Physcomitrium patens
Pp3c23_22030 0.5kb upstream 0.5kb upstream 500 false Chr23: 14537780-14538279 Physcomitrium patens
Pp3c23_22030 0.5kb downstream 0.5kb downstream 2325 true Chr23: 14538280-14540604 Physcomitrium patens
Pp3c23_22030 0.5kb downstream 0.5kb downstream 500 false Chr23: 14540105-14540604 Physcomitrium patens
Pp3c23_22030 1.0kb upstream 1.0kb upstream 2825 true Chr23: 14537280-14540104 Physcomitrium patens
Pp3c23_22030 1.0kb upstream 1.0kb upstream 1000 false Chr23: 14537280-14538279 Physcomitrium patens
Pp3c23_22030 1.0kb downstream 1.0kb downstream 2825 true Chr23: 14538280-14541104 Physcomitrium patens
Pp3c23_22030 1.0kb downstream 1.0kb downstream 1000 false Chr23: 14540105-14541104 Physcomitrium patens
Pp3c23_22030 2.0kb upstream 2.0kb upstream 3825 true Chr23: 14536280-14540104 Physcomitrium patens
Pp3c23_22030 2.0kb upstream 2.0kb upstream 2000 false Chr23: 14536280-14538279 Physcomitrium patens
Pp3c23_22030 2.0kb downstream 2.0kb downstream 3825 true Chr23: 14538280-14542104 Physcomitrium patens
Pp3c23_22030 2.0kb downstream 2.0kb downstream 2000 false Chr23: 14540105-14542104 Physcomitrium patens
Pp3c23_22030 5.0kb upstream 5.0kb upstream 6825 true Chr23: 14533280-14540104 Physcomitrium patens
Pp3c23_22030 5.0kb upstream 5.0kb upstream 5000 false Chr23: 14533280-14538279 Physcomitrium patens
Pp3c23_22030 5.0kb downstream 5.0kb downstream 6825 true Chr23: 14538280-14545104 Physcomitrium patens
Pp3c23_22030 5.0kb downstream 5.0kb downstream 5000 false Chr23: 14540105-14545104 Physcomitrium patens
Pp3c23_22030 10.0kb upstream 10.0kb upstream 11825 true Chr23: 14528280-14540104 Physcomitrium patens
Pp3c23_22030 10.0kb upstream 10.0kb upstream 10000 false Chr23: 14528280-14538279 Physcomitrium patens
Pp3c23_22030 10.0kb downstream 10.0kb downstream 11825 true Chr23: 14538280-14550104 Physcomitrium patens
Pp3c23_22030 10.0kb downstream 10.0kb downstream 10000 false Chr23: 14540105-14550104 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343821 5274 Embryophyte View MSA
123426521 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.006       Low
cufflinks 10.126        
cufflinks 8.433       Low
cufflinks 15.524       High
cufflinks 11.754        
cufflinks 10.629        
cufflinks 14.164     High  
cufflinks 13.669        
cufflinks 11.076        
cufflinks 11.466        
cufflinks 11.577        
cufflinks 10.462        
cufflinks 11.535        
cufflinks 18.889       High
cufflinks 11.202        
cufflinks 11.399        
cufflinks 10.785        
cufflinks 12.731        
cufflinks 10.16        
cufflinks 14.978       High
cufflinks 10.946        
cufflinks 14.055        
cufflinks 17.223       High
cufflinks 10.327        
cufflinks 13.711        
cufflinks 12.224        
cufflinks 13.244        
cufflinks 9.488       Low
cufflinks 17.221       High
cufflinks 15.141       High

0 Strain