Gene : Pp3c23_8210 P. patens v3.3
Defline:  (1 of 1) PTHR18937//PTHR18937:SF223 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER Genomic Order:  304
Name:  ? Pp3c23_8210 Secondary Identifier:  ? PAC:32950499
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c23_8210 0.5kb upstream 0.5kb upstream 5930 true Chr23: 5511792-5517721 Physcomitrium patens
Pp3c23_8210 0.5kb upstream 0.5kb upstream 500 false Chr23: 5517222-5517721 Physcomitrium patens
Pp3c23_8210 0.5kb downstream 0.5kb downstream 5930 true Chr23: 5511292-5517221 Physcomitrium patens
Pp3c23_8210 0.5kb downstream 0.5kb downstream 500 false Chr23: 5511292-5511791 Physcomitrium patens
Pp3c23_8210 1.0kb upstream 1.0kb upstream 6430 true Chr23: 5511792-5518221 Physcomitrium patens
Pp3c23_8210 1.0kb upstream 1.0kb upstream 1000 false Chr23: 5517222-5518221 Physcomitrium patens
Pp3c23_8210 1.0kb downstream 1.0kb downstream 6430 true Chr23: 5510792-5517221 Physcomitrium patens
Pp3c23_8210 1.0kb downstream 1.0kb downstream 1000 false Chr23: 5510792-5511791 Physcomitrium patens
Pp3c23_8210 2.0kb upstream 2.0kb upstream 7430 true Chr23: 5511792-5519221 Physcomitrium patens
Pp3c23_8210 2.0kb upstream 2.0kb upstream 2000 false Chr23: 5517222-5519221 Physcomitrium patens
Pp3c23_8210 2.0kb downstream 2.0kb downstream 7430 true Chr23: 5509792-5517221 Physcomitrium patens
Pp3c23_8210 2.0kb downstream 2.0kb downstream 2000 false Chr23: 5509792-5511791 Physcomitrium patens
Pp3c23_8210 5.0kb upstream 5.0kb upstream 10430 true Chr23: 5511792-5522221 Physcomitrium patens
Pp3c23_8210 5.0kb upstream 5.0kb upstream 5000 false Chr23: 5517222-5522221 Physcomitrium patens
Pp3c23_8210 5.0kb downstream 5.0kb downstream 10430 true Chr23: 5506792-5517221 Physcomitrium patens
Pp3c23_8210 5.0kb downstream 5.0kb downstream 5000 false Chr23: 5506792-5511791 Physcomitrium patens
Pp3c23_8210 10.0kb upstream 10.0kb upstream 15430 true Chr23: 5511792-5527221 Physcomitrium patens
Pp3c23_8210 10.0kb upstream 10.0kb upstream 10000 false Chr23: 5517222-5527221 Physcomitrium patens
Pp3c23_8210 10.0kb downstream 10.0kb downstream 15430 true Chr23: 5501792-5517221 Physcomitrium patens
Pp3c23_8210 10.0kb downstream 10.0kb downstream 10000 false Chr23: 5501792-5511791 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342341 5274 Embryophyte View MSA
123427332 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.005     Low Low
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.028     Low  
cufflinks 0.009     Low  
cufflinks 0.005     Low Low
cufflinks 0.149       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.253       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.248       High
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain