Gene : Pp3c24_11680 P. patens v3.3
Defline:  (1 of 1) KOG2028 - ATPase related to the helicase subunit of the Holliday junction resolvase Genomic Order:  511
Name:  ? Pp3c24_11680 Secondary Identifier:  ? PAC:32909101
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c24_11680 0.5kb upstream 0.5kb upstream 5283 true Chr24: 8223702-8228984 Physcomitrium patens
Pp3c24_11680 0.5kb upstream 0.5kb upstream 500 false Chr24: 8223702-8224201 Physcomitrium patens
Pp3c24_11680 0.5kb downstream 0.5kb downstream 5283 true Chr24: 8224202-8229484 Physcomitrium patens
Pp3c24_11680 0.5kb downstream 0.5kb downstream 500 false Chr24: 8228985-8229484 Physcomitrium patens
Pp3c24_11680 1.0kb upstream 1.0kb upstream 5783 true Chr24: 8223202-8228984 Physcomitrium patens
Pp3c24_11680 1.0kb upstream 1.0kb upstream 1000 false Chr24: 8223202-8224201 Physcomitrium patens
Pp3c24_11680 1.0kb downstream 1.0kb downstream 5783 true Chr24: 8224202-8229984 Physcomitrium patens
Pp3c24_11680 1.0kb downstream 1.0kb downstream 1000 false Chr24: 8228985-8229984 Physcomitrium patens
Pp3c24_11680 2.0kb upstream 2.0kb upstream 6783 true Chr24: 8222202-8228984 Physcomitrium patens
Pp3c24_11680 2.0kb upstream 2.0kb upstream 2000 false Chr24: 8222202-8224201 Physcomitrium patens
Pp3c24_11680 2.0kb downstream 2.0kb downstream 6783 true Chr24: 8224202-8230984 Physcomitrium patens
Pp3c24_11680 2.0kb downstream 2.0kb downstream 2000 false Chr24: 8228985-8230984 Physcomitrium patens
Pp3c24_11680 5.0kb upstream 5.0kb upstream 9783 true Chr24: 8219202-8228984 Physcomitrium patens
Pp3c24_11680 5.0kb upstream 5.0kb upstream 5000 false Chr24: 8219202-8224201 Physcomitrium patens
Pp3c24_11680 5.0kb downstream 5.0kb downstream 9783 true Chr24: 8224202-8233984 Physcomitrium patens
Pp3c24_11680 5.0kb downstream 5.0kb downstream 5000 false Chr24: 8228985-8233984 Physcomitrium patens
Pp3c24_11680 10.0kb upstream 10.0kb upstream 14783 true Chr24: 8214202-8228984 Physcomitrium patens
Pp3c24_11680 10.0kb upstream 10.0kb upstream 10000 false Chr24: 8214202-8224201 Physcomitrium patens
Pp3c24_11680 10.0kb downstream 10.0kb downstream 14783 true Chr24: 8224202-8238984 Physcomitrium patens
Pp3c24_11680 10.0kb downstream 10.0kb downstream 10000 false Chr24: 8228985-8238984 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121350619 5274 Embryophyte View MSA
123381819 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.585       Low
cufflinks 3.551        
cufflinks 4.266        
cufflinks 3.931        
cufflinks 3.007       Low
cufflinks 3.932        
cufflinks 3.931        
cufflinks 2.885       Low
cufflinks 3.592        
cufflinks 2.831       Low
cufflinks 3.913        
cufflinks 5.338       High
cufflinks 2.913       Low
cufflinks 3.309        
cufflinks 3.148        
cufflinks 3.029       Low
cufflinks 4.846        
cufflinks 4.828        
cufflinks 4.152        
cufflinks 3.483        
cufflinks 4.967       High
cufflinks 2.867       Low
cufflinks 4.998       High
cufflinks 5.849       High
cufflinks 5.183       High
cufflinks 4.858        
cufflinks 4.721        
cufflinks 3.142        
cufflinks 5.35       High
cufflinks 3.893        

0 Strain