Gene : Pp3c24_10460 P. patens v3.3
Defline:  (1 of 2) 1.3.1.21 - 7-dehydrocholesterol reductase / Sterol Delta(7)-reductase Genomic Order:  457
Name:  ? Pp3c24_10460 Secondary Identifier:  ? PAC:32908813
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c24_10460 0.5kb upstream 0.5kb upstream 5737 true Chr24: 7265250-7270986 Physcomitrium patens
Pp3c24_10460 0.5kb upstream 0.5kb upstream 500 false Chr24: 7265250-7265749 Physcomitrium patens
Pp3c24_10460 0.5kb downstream 0.5kb downstream 5737 true Chr24: 7265750-7271486 Physcomitrium patens
Pp3c24_10460 0.5kb downstream 0.5kb downstream 500 false Chr24: 7270987-7271486 Physcomitrium patens
Pp3c24_10460 1.0kb upstream 1.0kb upstream 6237 true Chr24: 7264750-7270986 Physcomitrium patens
Pp3c24_10460 1.0kb upstream 1.0kb upstream 1000 false Chr24: 7264750-7265749 Physcomitrium patens
Pp3c24_10460 1.0kb downstream 1.0kb downstream 6237 true Chr24: 7265750-7271986 Physcomitrium patens
Pp3c24_10460 1.0kb downstream 1.0kb downstream 1000 false Chr24: 7270987-7271986 Physcomitrium patens
Pp3c24_10460 2.0kb upstream 2.0kb upstream 7237 true Chr24: 7263750-7270986 Physcomitrium patens
Pp3c24_10460 2.0kb upstream 2.0kb upstream 2000 false Chr24: 7263750-7265749 Physcomitrium patens
Pp3c24_10460 2.0kb downstream 2.0kb downstream 7237 true Chr24: 7265750-7272986 Physcomitrium patens
Pp3c24_10460 2.0kb downstream 2.0kb downstream 2000 false Chr24: 7270987-7272986 Physcomitrium patens
Pp3c24_10460 5.0kb upstream 5.0kb upstream 10237 true Chr24: 7260750-7270986 Physcomitrium patens
Pp3c24_10460 5.0kb upstream 5.0kb upstream 5000 false Chr24: 7260750-7265749 Physcomitrium patens
Pp3c24_10460 5.0kb downstream 5.0kb downstream 10237 true Chr24: 7265750-7275986 Physcomitrium patens
Pp3c24_10460 5.0kb downstream 5.0kb downstream 5000 false Chr24: 7270987-7275986 Physcomitrium patens
Pp3c24_10460 10.0kb upstream 10.0kb upstream 15237 true Chr24: 7255750-7270986 Physcomitrium patens
Pp3c24_10460 10.0kb upstream 10.0kb upstream 10000 false Chr24: 7255750-7265749 Physcomitrium patens
Pp3c24_10460 10.0kb downstream 10.0kb downstream 15237 true Chr24: 7265750-7280986 Physcomitrium patens
Pp3c24_10460 10.0kb downstream 10.0kb downstream 10000 false Chr24: 7270987-7280986 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344145 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.95        
cufflinks 8.246        
cufflinks 2.982       Low
cufflinks 2.138       Low
cufflinks 4.034        
cufflinks 1.8       Low
cufflinks 5.437        
cufflinks 10.311       High
cufflinks 6.147        
cufflinks 1.52       Low
cufflinks 5.805        
cufflinks 3.453       Low
cufflinks 5.312        
cufflinks 7.193        
cufflinks 6.343        
cufflinks 6.876        
cufflinks 5.422        
cufflinks 6.568        
cufflinks 7.105        
cufflinks 8.119        
cufflinks 6.171        
cufflinks 7.174        
cufflinks 7.978        
cufflinks 7.083        
cufflinks 4.735        
cufflinks 7.073        
cufflinks 5.634        
cufflinks 5.606        
cufflinks 7.585        
cufflinks 7.485        

0 Strain