Gene : Pp3c24_330 P. patens v3.3
Defline:  (1 of 1) PTHR36080:SF1 - DBJ Genomic Order:  19
Name:  ? Pp3c24_330 Secondary Identifier:  ? PAC:32910107
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c24_330 0.5kb upstream 0.5kb upstream 3225 true Chr24: 173457-176681 Physcomitrium patens
Pp3c24_330 0.5kb upstream 0.5kb upstream 500 false Chr24: 176182-176681 Physcomitrium patens
Pp3c24_330 0.5kb downstream 0.5kb downstream 3225 true Chr24: 172957-176181 Physcomitrium patens
Pp3c24_330 0.5kb downstream 0.5kb downstream 500 false Chr24: 172957-173456 Physcomitrium patens
Pp3c24_330 1.0kb upstream 1.0kb upstream 3725 true Chr24: 173457-177181 Physcomitrium patens
Pp3c24_330 1.0kb upstream 1.0kb upstream 1000 false Chr24: 176182-177181 Physcomitrium patens
Pp3c24_330 1.0kb downstream 1.0kb downstream 3725 true Chr24: 172457-176181 Physcomitrium patens
Pp3c24_330 1.0kb downstream 1.0kb downstream 1000 false Chr24: 172457-173456 Physcomitrium patens
Pp3c24_330 2.0kb upstream 2.0kb upstream 4725 true Chr24: 173457-178181 Physcomitrium patens
Pp3c24_330 2.0kb upstream 2.0kb upstream 2000 false Chr24: 176182-178181 Physcomitrium patens
Pp3c24_330 2.0kb downstream 2.0kb downstream 4725 true Chr24: 171457-176181 Physcomitrium patens
Pp3c24_330 2.0kb downstream 2.0kb downstream 2000 false Chr24: 171457-173456 Physcomitrium patens
Pp3c24_330 5.0kb upstream 5.0kb upstream 7725 true Chr24: 173457-181181 Physcomitrium patens
Pp3c24_330 5.0kb upstream 5.0kb upstream 5000 false Chr24: 176182-181181 Physcomitrium patens
Pp3c24_330 5.0kb downstream 5.0kb downstream 7725 true Chr24: 168457-176181 Physcomitrium patens
Pp3c24_330 5.0kb downstream 5.0kb downstream 5000 false Chr24: 168457-173456 Physcomitrium patens
Pp3c24_330 10.0kb upstream 10.0kb upstream 12725 true Chr24: 173457-186181 Physcomitrium patens
Pp3c24_330 10.0kb upstream 10.0kb upstream 10000 false Chr24: 176182-186181 Physcomitrium patens
Pp3c24_330 10.0kb downstream 10.0kb downstream 12725 true Chr24: 163457-176181 Physcomitrium patens
Pp3c24_330 10.0kb downstream 10.0kb downstream 10000 false Chr24: 163457-173456 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344014 5274 Embryophyte View MSA
123425570 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.621        
cufflinks 11.635        
cufflinks 9.235        
cufflinks 16.422       High
cufflinks 14.872        
cufflinks 12.736        
cufflinks 15.228        
cufflinks 15.199        
cufflinks 11.976        
cufflinks 13.155        
cufflinks 12.527        
cufflinks 4.938       Low
cufflinks 9.923        
cufflinks 5.423       Low
cufflinks 10.445        
cufflinks 19.009       High
cufflinks 9.084        
cufflinks 15.21        
cufflinks 12.386        
cufflinks 11.945        
cufflinks 16.233       High
cufflinks 4.673       Low
cufflinks 8.833        
cufflinks 9.774        
cufflinks 12.912        
cufflinks 12.407        
cufflinks 14.613        
cufflinks 14.583        
cufflinks 10.019        
cufflinks 12.366        

0 Strain