Gene : Pp3c24_9020 P. patens v3.3
Defline:  (1 of 2) PTHR19853 - WD REPEAT CONTAINING PROTEIN 3 WDR3 Genomic Order:  389
Name:  ? Pp3c24_9020 Secondary Identifier:  ? PAC:32909785
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c24_9020 0.5kb upstream 0.5kb upstream 6574 true Chr24: 6164020-6170593 Physcomitrium patens
Pp3c24_9020 0.5kb upstream 0.5kb upstream 500 false Chr24: 6164020-6164519 Physcomitrium patens
Pp3c24_9020 0.5kb downstream 0.5kb downstream 6574 true Chr24: 6164520-6171093 Physcomitrium patens
Pp3c24_9020 0.5kb downstream 0.5kb downstream 500 false Chr24: 6170594-6171093 Physcomitrium patens
Pp3c24_9020 1.0kb upstream 1.0kb upstream 7074 true Chr24: 6163520-6170593 Physcomitrium patens
Pp3c24_9020 1.0kb upstream 1.0kb upstream 1000 false Chr24: 6163520-6164519 Physcomitrium patens
Pp3c24_9020 1.0kb downstream 1.0kb downstream 7074 true Chr24: 6164520-6171593 Physcomitrium patens
Pp3c24_9020 1.0kb downstream 1.0kb downstream 1000 false Chr24: 6170594-6171593 Physcomitrium patens
Pp3c24_9020 2.0kb upstream 2.0kb upstream 8074 true Chr24: 6162520-6170593 Physcomitrium patens
Pp3c24_9020 2.0kb upstream 2.0kb upstream 2000 false Chr24: 6162520-6164519 Physcomitrium patens
Pp3c24_9020 2.0kb downstream 2.0kb downstream 8074 true Chr24: 6164520-6172593 Physcomitrium patens
Pp3c24_9020 2.0kb downstream 2.0kb downstream 2000 false Chr24: 6170594-6172593 Physcomitrium patens
Pp3c24_9020 5.0kb upstream 5.0kb upstream 11074 true Chr24: 6159520-6170593 Physcomitrium patens
Pp3c24_9020 5.0kb upstream 5.0kb upstream 5000 false Chr24: 6159520-6164519 Physcomitrium patens
Pp3c24_9020 5.0kb downstream 5.0kb downstream 11074 true Chr24: 6164520-6175593 Physcomitrium patens
Pp3c24_9020 5.0kb downstream 5.0kb downstream 5000 false Chr24: 6170594-6175593 Physcomitrium patens
Pp3c24_9020 10.0kb upstream 10.0kb upstream 16074 true Chr24: 6154520-6170593 Physcomitrium patens
Pp3c24_9020 10.0kb upstream 10.0kb upstream 10000 false Chr24: 6154520-6164519 Physcomitrium patens
Pp3c24_9020 10.0kb downstream 10.0kb downstream 16074 true Chr24: 6164520-6180593 Physcomitrium patens
Pp3c24_9020 10.0kb downstream 10.0kb downstream 10000 false Chr24: 6170594-6180593 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121346306 5274 Embryophyte View MSA
123424601 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.122        
cufflinks 0.258       High
cufflinks 0.185        
cufflinks 0.193        
cufflinks 0.222        
cufflinks 0.159        
cufflinks 0.171        
cufflinks 0.186        
cufflinks 0.306       High
cufflinks 0.173        
cufflinks 0.21        
cufflinks 0.127        
cufflinks 0.135        
cufflinks 0.362       High
cufflinks 0.17        
cufflinks 0.251        
cufflinks 0.091       Low
cufflinks 0.235        
cufflinks 0.388       High
cufflinks 0.182        
cufflinks 0.324       High
cufflinks 0.144        
cufflinks 0.18        
cufflinks 0.144        
cufflinks 0.118        
cufflinks 0.118        
cufflinks 0.077     Low Low
cufflinks 0.091       Low
cufflinks 0.185        
cufflinks 0.19        

0 Strain