Gene : Pp3c24_16760 P. patens v3.3
Genomic Order:  771 Name:  ? Pp3c24_16760
Secondary Identifier:  ? PAC:32911042
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c24_16760 0.5kb upstream 0.5kb upstream 2302 true Chr24: 10933427-10935728 Physcomitrium patens
Pp3c24_16760 0.5kb upstream 0.5kb upstream 500 false Chr24: 10935229-10935728 Physcomitrium patens
Pp3c24_16760 0.5kb downstream 0.5kb downstream 2302 true Chr24: 10932927-10935228 Physcomitrium patens
Pp3c24_16760 0.5kb downstream 0.5kb downstream 500 false Chr24: 10932927-10933426 Physcomitrium patens
Pp3c24_16760 1.0kb upstream 1.0kb upstream 2802 true Chr24: 10933427-10936228 Physcomitrium patens
Pp3c24_16760 1.0kb upstream 1.0kb upstream 1000 false Chr24: 10935229-10936228 Physcomitrium patens
Pp3c24_16760 1.0kb downstream 1.0kb downstream 2802 true Chr24: 10932427-10935228 Physcomitrium patens
Pp3c24_16760 1.0kb downstream 1.0kb downstream 1000 false Chr24: 10932427-10933426 Physcomitrium patens
Pp3c24_16760 2.0kb upstream 2.0kb upstream 3802 true Chr24: 10933427-10937228 Physcomitrium patens
Pp3c24_16760 2.0kb upstream 2.0kb upstream 2000 false Chr24: 10935229-10937228 Physcomitrium patens
Pp3c24_16760 2.0kb downstream 2.0kb downstream 3802 true Chr24: 10931427-10935228 Physcomitrium patens
Pp3c24_16760 2.0kb downstream 2.0kb downstream 2000 false Chr24: 10931427-10933426 Physcomitrium patens
Pp3c24_16760 5.0kb upstream 5.0kb upstream 6802 true Chr24: 10933427-10940228 Physcomitrium patens
Pp3c24_16760 5.0kb upstream 5.0kb upstream 5000 false Chr24: 10935229-10940228 Physcomitrium patens
Pp3c24_16760 5.0kb downstream 5.0kb downstream 6802 true Chr24: 10928427-10935228 Physcomitrium patens
Pp3c24_16760 5.0kb downstream 5.0kb downstream 5000 false Chr24: 10928427-10933426 Physcomitrium patens
Pp3c24_16760 10.0kb upstream 10.0kb upstream 11802 true Chr24: 10933427-10945228 Physcomitrium patens
Pp3c24_16760 10.0kb upstream 10.0kb upstream 10000 false Chr24: 10935229-10945228 Physcomitrium patens
Pp3c24_16760 10.0kb downstream 10.0kb downstream 11802 true Chr24: 10923427-10935228 Physcomitrium patens
Pp3c24_16760 10.0kb downstream 10.0kb downstream 10000 false Chr24: 10923427-10933426 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121336526 5274 Embryophyte View MSA
123373349 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.034     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.013     Low  
cufflinks 0.249       High
cufflinks 0.015     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.023     Low  
cufflinks 0.003     Low Low
cufflinks 0.009     Low  
cufflinks 0.102       High
cufflinks 0.165       High
cufflinks 0.005     Low  
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.005     Low  
cufflinks 0.031     Low  
cufflinks 0.043     Low  
cufflinks 0.107       High
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain