Gene : Pp3c24_18590 P. patens v3.3
Defline:  (1 of 2) PTHR21083 - TWISTER Genomic Order:  830
Name:  ? Pp3c24_18590 Secondary Identifier:  ? PAC:32910515
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c24_18590 0.5kb upstream 0.5kb upstream 1802 true Chr24: 12502683-12504484 Physcomitrium patens
Pp3c24_18590 0.5kb upstream 0.5kb upstream 500 false Chr24: 12503985-12504484 Physcomitrium patens
Pp3c24_18590 0.5kb downstream 0.5kb downstream 1802 true Chr24: 12502183-12503984 Physcomitrium patens
Pp3c24_18590 0.5kb downstream 0.5kb downstream 500 false Chr24: 12502183-12502682 Physcomitrium patens
Pp3c24_18590 1.0kb upstream 1.0kb upstream 2302 true Chr24: 12502683-12504984 Physcomitrium patens
Pp3c24_18590 1.0kb upstream 1.0kb upstream 1000 false Chr24: 12503985-12504984 Physcomitrium patens
Pp3c24_18590 1.0kb downstream 1.0kb downstream 2302 true Chr24: 12501683-12503984 Physcomitrium patens
Pp3c24_18590 1.0kb downstream 1.0kb downstream 1000 false Chr24: 12501683-12502682 Physcomitrium patens
Pp3c24_18590 2.0kb upstream 2.0kb upstream 3302 true Chr24: 12502683-12505984 Physcomitrium patens
Pp3c24_18590 2.0kb upstream 2.0kb upstream 2000 false Chr24: 12503985-12505984 Physcomitrium patens
Pp3c24_18590 2.0kb downstream 2.0kb downstream 3302 true Chr24: 12500683-12503984 Physcomitrium patens
Pp3c24_18590 2.0kb downstream 2.0kb downstream 2000 false Chr24: 12500683-12502682 Physcomitrium patens
Pp3c24_18590 5.0kb upstream 5.0kb upstream 6302 true Chr24: 12502683-12508984 Physcomitrium patens
Pp3c24_18590 5.0kb upstream 5.0kb upstream 5000 false Chr24: 12503985-12508984 Physcomitrium patens
Pp3c24_18590 5.0kb downstream 5.0kb downstream 6302 true Chr24: 12497683-12503984 Physcomitrium patens
Pp3c24_18590 5.0kb downstream 5.0kb downstream 5000 false Chr24: 12497683-12502682 Physcomitrium patens
Pp3c24_18590 10.0kb upstream 10.0kb upstream 11302 true Chr24: 12502683-12513984 Physcomitrium patens
Pp3c24_18590 10.0kb upstream 10.0kb upstream 10000 false Chr24: 12503985-12513984 Physcomitrium patens
Pp3c24_18590 10.0kb downstream 10.0kb downstream 11302 true Chr24: 12492683-12503984 Physcomitrium patens
Pp3c24_18590 10.0kb downstream 10.0kb downstream 10000 false Chr24: 12492683-12502682 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342440 5274 Embryophyte View MSA
123427223 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.016     Low High
cufflinks 0.003     Low  
cufflinks 0.015     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.001     Low Low
cufflinks 0.002     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low High
cufflinks 0.004     Low  
cufflinks 0.013     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.002     Low  
cufflinks 0.009     Low  
cufflinks 0.007     Low  
cufflinks 0.021     Low High
cufflinks 0.008     Low  

0 Strain