Gene : Pp3c24_7060 P. patens v3.3
Genomic Order:  319 Name:  ? Pp3c24_7060
Secondary Identifier:  ? PAC:32910709
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c24_7060 0.5kb upstream 0.5kb upstream 3603 true Chr24: 4678778-4682380 Physcomitrium patens
Pp3c24_7060 0.5kb upstream 0.5kb upstream 500 false Chr24: 4681881-4682380 Physcomitrium patens
Pp3c24_7060 0.5kb downstream 0.5kb downstream 3603 true Chr24: 4678278-4681880 Physcomitrium patens
Pp3c24_7060 0.5kb downstream 0.5kb downstream 500 false Chr24: 4678278-4678777 Physcomitrium patens
Pp3c24_7060 1.0kb upstream 1.0kb upstream 4103 true Chr24: 4678778-4682880 Physcomitrium patens
Pp3c24_7060 1.0kb upstream 1.0kb upstream 1000 false Chr24: 4681881-4682880 Physcomitrium patens
Pp3c24_7060 1.0kb downstream 1.0kb downstream 4103 true Chr24: 4677778-4681880 Physcomitrium patens
Pp3c24_7060 1.0kb downstream 1.0kb downstream 1000 false Chr24: 4677778-4678777 Physcomitrium patens
Pp3c24_7060 2.0kb upstream 2.0kb upstream 5103 true Chr24: 4678778-4683880 Physcomitrium patens
Pp3c24_7060 2.0kb upstream 2.0kb upstream 2000 false Chr24: 4681881-4683880 Physcomitrium patens
Pp3c24_7060 2.0kb downstream 2.0kb downstream 5103 true Chr24: 4676778-4681880 Physcomitrium patens
Pp3c24_7060 2.0kb downstream 2.0kb downstream 2000 false Chr24: 4676778-4678777 Physcomitrium patens
Pp3c24_7060 5.0kb upstream 5.0kb upstream 8103 true Chr24: 4678778-4686880 Physcomitrium patens
Pp3c24_7060 5.0kb upstream 5.0kb upstream 5000 false Chr24: 4681881-4686880 Physcomitrium patens
Pp3c24_7060 5.0kb downstream 5.0kb downstream 8103 true Chr24: 4673778-4681880 Physcomitrium patens
Pp3c24_7060 5.0kb downstream 5.0kb downstream 5000 false Chr24: 4673778-4678777 Physcomitrium patens
Pp3c24_7060 10.0kb upstream 10.0kb upstream 13103 true Chr24: 4678778-4691880 Physcomitrium patens
Pp3c24_7060 10.0kb upstream 10.0kb upstream 10000 false Chr24: 4681881-4691880 Physcomitrium patens
Pp3c24_7060 10.0kb downstream 10.0kb downstream 13103 true Chr24: 4668778-4681880 Physcomitrium patens
Pp3c24_7060 10.0kb downstream 10.0kb downstream 10000 false Chr24: 4668778-4678777 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123429170 5275 Viridiplantae View MSA
121346689 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.351        
cufflinks 0.067       Low
cufflinks 0.323        
cufflinks 0.255        
cufflinks 0.313        
cufflinks 0.189        
cufflinks 0.011     Low Low
cufflinks 0.046     Low Low
cufflinks 0.119        
cufflinks 0.089        
cufflinks 0.21        
cufflinks 0.283        
cufflinks 0.19        
cufflinks 0.205        
cufflinks 0.085     Low  
cufflinks 0.133        
cufflinks 0.213        
cufflinks 0.233        
cufflinks 0.121        
cufflinks 0.171        
cufflinks 0.235        
cufflinks 0.298        
cufflinks 0.051     Low Low
cufflinks 0.313        
cufflinks 0.46       High
cufflinks 0.259        
cufflinks 0.017     Low Low
cufflinks 0.212        
cufflinks 0.244        
cufflinks 0.277        

0 Strain