Gene : Pp3c25_130 P. patens v3.3
Genomic Order:  9 Name:  ? Pp3c25_130
Secondary Identifier:  ? PAC:32980349
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c25_130 0.5kb upstream 0.5kb upstream 5957 true Chr25: 105132-111088 Physcomitrium patens
Pp3c25_130 0.5kb upstream 0.5kb upstream 500 false Chr25: 110589-111088 Physcomitrium patens
Pp3c25_130 0.5kb downstream 0.5kb downstream 5957 true Chr25: 104632-110588 Physcomitrium patens
Pp3c25_130 0.5kb downstream 0.5kb downstream 500 false Chr25: 104632-105131 Physcomitrium patens
Pp3c25_130 1.0kb upstream 1.0kb upstream 6457 true Chr25: 105132-111588 Physcomitrium patens
Pp3c25_130 1.0kb upstream 1.0kb upstream 1000 false Chr25: 110589-111588 Physcomitrium patens
Pp3c25_130 1.0kb downstream 1.0kb downstream 6457 true Chr25: 104132-110588 Physcomitrium patens
Pp3c25_130 1.0kb downstream 1.0kb downstream 1000 false Chr25: 104132-105131 Physcomitrium patens
Pp3c25_130 2.0kb upstream 2.0kb upstream 7457 true Chr25: 105132-112588 Physcomitrium patens
Pp3c25_130 2.0kb upstream 2.0kb upstream 2000 false Chr25: 110589-112588 Physcomitrium patens
Pp3c25_130 2.0kb downstream 2.0kb downstream 7457 true Chr25: 103132-110588 Physcomitrium patens
Pp3c25_130 2.0kb downstream 2.0kb downstream 2000 false Chr25: 103132-105131 Physcomitrium patens
Pp3c25_130 5.0kb upstream 5.0kb upstream 10457 true Chr25: 105132-115588 Physcomitrium patens
Pp3c25_130 5.0kb upstream 5.0kb upstream 5000 false Chr25: 110589-115588 Physcomitrium patens
Pp3c25_130 5.0kb downstream 5.0kb downstream 10457 true Chr25: 100132-110588 Physcomitrium patens
Pp3c25_130 5.0kb downstream 5.0kb downstream 5000 false Chr25: 100132-105131 Physcomitrium patens
Pp3c25_130 10.0kb upstream 10.0kb upstream 15457 true Chr25: 105132-120588 Physcomitrium patens
Pp3c25_130 10.0kb upstream 10.0kb upstream 10000 false Chr25: 110589-120588 Physcomitrium patens
Pp3c25_130 10.0kb downstream 10.0kb downstream 15457 true Chr25: 95132-110588 Physcomitrium patens
Pp3c25_130 10.0kb downstream 10.0kb downstream 10000 false Chr25: 95132-105131 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342439 5274 Embryophyte View MSA
123378999 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.778        
cufflinks 5.472        
cufflinks 9.023        
cufflinks 7.152        
cufflinks 7.279        
cufflinks 8.347        
cufflinks 0.937       Low
cufflinks 8.959        
cufflinks 8.241        
cufflinks 5.712        
cufflinks 1.583       Low
cufflinks 7.745        
cufflinks 6.273        
cufflinks 2.089       Low
cufflinks 2.974        
cufflinks 10.013       High
cufflinks 6.653        
cufflinks 7.881        
cufflinks 7.296        
cufflinks 7.913        
cufflinks 6.255        
cufflinks 4.262        
cufflinks 0.89       Low
cufflinks 5.968        
cufflinks 3.46        
cufflinks 5.787        
cufflinks 5.383        
cufflinks 1.716       Low
cufflinks 7.099        
cufflinks 8.39        

0 Strain