Gene : Pp3c25_2680 P. patens v3.3
Defline:  (1 of 1) PTHR13183 - AXONEMAL INNER ARM DYNEIN LIGHT CHAIN 28 Genomic Order:  140
Name:  ? Pp3c25_2680 Secondary Identifier:  ? PAC:32980471
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c25_2680 0.5kb upstream 0.5kb upstream 4844 true Chr25: 1799809-1804652 Physcomitrium patens
Pp3c25_2680 0.5kb upstream 0.5kb upstream 500 false Chr25: 1804153-1804652 Physcomitrium patens
Pp3c25_2680 0.5kb downstream 0.5kb downstream 4844 true Chr25: 1799309-1804152 Physcomitrium patens
Pp3c25_2680 0.5kb downstream 0.5kb downstream 500 false Chr25: 1799309-1799808 Physcomitrium patens
Pp3c25_2680 1.0kb upstream 1.0kb upstream 5344 true Chr25: 1799809-1805152 Physcomitrium patens
Pp3c25_2680 1.0kb upstream 1.0kb upstream 1000 false Chr25: 1804153-1805152 Physcomitrium patens
Pp3c25_2680 1.0kb downstream 1.0kb downstream 5344 true Chr25: 1798809-1804152 Physcomitrium patens
Pp3c25_2680 1.0kb downstream 1.0kb downstream 1000 false Chr25: 1798809-1799808 Physcomitrium patens
Pp3c25_2680 2.0kb upstream 2.0kb upstream 6344 true Chr25: 1799809-1806152 Physcomitrium patens
Pp3c25_2680 2.0kb upstream 2.0kb upstream 2000 false Chr25: 1804153-1806152 Physcomitrium patens
Pp3c25_2680 2.0kb downstream 2.0kb downstream 6344 true Chr25: 1797809-1804152 Physcomitrium patens
Pp3c25_2680 2.0kb downstream 2.0kb downstream 2000 false Chr25: 1797809-1799808 Physcomitrium patens
Pp3c25_2680 5.0kb upstream 5.0kb upstream 9344 true Chr25: 1799809-1809152 Physcomitrium patens
Pp3c25_2680 5.0kb upstream 5.0kb upstream 5000 false Chr25: 1804153-1809152 Physcomitrium patens
Pp3c25_2680 5.0kb downstream 5.0kb downstream 9344 true Chr25: 1794809-1804152 Physcomitrium patens
Pp3c25_2680 5.0kb downstream 5.0kb downstream 5000 false Chr25: 1794809-1799808 Physcomitrium patens
Pp3c25_2680 10.0kb upstream 10.0kb upstream 14344 true Chr25: 1799809-1814152 Physcomitrium patens
Pp3c25_2680 10.0kb upstream 10.0kb upstream 10000 false Chr25: 1804153-1814152 Physcomitrium patens
Pp3c25_2680 10.0kb downstream 10.0kb downstream 14344 true Chr25: 1789809-1804152 Physcomitrium patens
Pp3c25_2680 10.0kb downstream 10.0kb downstream 10000 false Chr25: 1789809-1799808 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342952 5274 Embryophyte View MSA
123427308 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.467       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  

0 Strain