Gene : Pp3c25_2110 P. patens v3.3
Defline:  (1 of 9) PF12770 - CHAT domain (CHAT) Genomic Order:  112
Name:  ? Pp3c25_2110 Secondary Identifier:  ? PAC:32980316
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c25_2110 0.5kb upstream 0.5kb upstream 1681 true Chr25: 1325608-1327288 Physcomitrium patens
Pp3c25_2110 0.5kb upstream 0.5kb upstream 500 false Chr25: 1325608-1326107 Physcomitrium patens
Pp3c25_2110 0.5kb downstream 0.5kb downstream 1681 true Chr25: 1326108-1327788 Physcomitrium patens
Pp3c25_2110 0.5kb downstream 0.5kb downstream 500 false Chr25: 1327289-1327788 Physcomitrium patens
Pp3c25_2110 1.0kb upstream 1.0kb upstream 2181 true Chr25: 1325108-1327288 Physcomitrium patens
Pp3c25_2110 1.0kb upstream 1.0kb upstream 1000 false Chr25: 1325108-1326107 Physcomitrium patens
Pp3c25_2110 1.0kb downstream 1.0kb downstream 2181 true Chr25: 1326108-1328288 Physcomitrium patens
Pp3c25_2110 1.0kb downstream 1.0kb downstream 1000 false Chr25: 1327289-1328288 Physcomitrium patens
Pp3c25_2110 2.0kb upstream 2.0kb upstream 3181 true Chr25: 1324108-1327288 Physcomitrium patens
Pp3c25_2110 2.0kb upstream 2.0kb upstream 2000 false Chr25: 1324108-1326107 Physcomitrium patens
Pp3c25_2110 2.0kb downstream 2.0kb downstream 3181 true Chr25: 1326108-1329288 Physcomitrium patens
Pp3c25_2110 2.0kb downstream 2.0kb downstream 2000 false Chr25: 1327289-1329288 Physcomitrium patens
Pp3c25_2110 5.0kb upstream 5.0kb upstream 6181 true Chr25: 1321108-1327288 Physcomitrium patens
Pp3c25_2110 5.0kb upstream 5.0kb upstream 5000 false Chr25: 1321108-1326107 Physcomitrium patens
Pp3c25_2110 5.0kb downstream 5.0kb downstream 6181 true Chr25: 1326108-1332288 Physcomitrium patens
Pp3c25_2110 5.0kb downstream 5.0kb downstream 5000 false Chr25: 1327289-1332288 Physcomitrium patens
Pp3c25_2110 10.0kb upstream 10.0kb upstream 11181 true Chr25: 1316108-1327288 Physcomitrium patens
Pp3c25_2110 10.0kb upstream 10.0kb upstream 10000 false Chr25: 1316108-1326107 Physcomitrium patens
Pp3c25_2110 10.0kb downstream 10.0kb downstream 11181 true Chr25: 1326108-1337288 Physcomitrium patens
Pp3c25_2110 10.0kb downstream 10.0kb downstream 10000 false Chr25: 1327289-1337288 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342551 5274 Embryophyte View MSA
123379076 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain