Gene : Pp3c25_7150 P. patens v3.3
Defline:  (1 of 1) PF00939//PF02080 - Sodium:sulfate symporter transmembrane region (Na_sulph_symp) // TrkA-C domain (TrkA_C) Genomic Order:  345
Name:  ? Pp3c25_7150 Secondary Identifier:  ? PAC:32980848
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c25_7150 0.5kb upstream 0.5kb upstream 4596 true Chr25: 4728585-4733180 Physcomitrium patens
Pp3c25_7150 0.5kb upstream 0.5kb upstream 500 false Chr25: 4732681-4733180 Physcomitrium patens
Pp3c25_7150 0.5kb downstream 0.5kb downstream 4596 true Chr25: 4728085-4732680 Physcomitrium patens
Pp3c25_7150 0.5kb downstream 0.5kb downstream 500 false Chr25: 4728085-4728584 Physcomitrium patens
Pp3c25_7150 1.0kb upstream 1.0kb upstream 5096 true Chr25: 4728585-4733680 Physcomitrium patens
Pp3c25_7150 1.0kb upstream 1.0kb upstream 1000 false Chr25: 4732681-4733680 Physcomitrium patens
Pp3c25_7150 1.0kb downstream 1.0kb downstream 5096 true Chr25: 4727585-4732680 Physcomitrium patens
Pp3c25_7150 1.0kb downstream 1.0kb downstream 1000 false Chr25: 4727585-4728584 Physcomitrium patens
Pp3c25_7150 2.0kb upstream 2.0kb upstream 6096 true Chr25: 4728585-4734680 Physcomitrium patens
Pp3c25_7150 2.0kb upstream 2.0kb upstream 2000 false Chr25: 4732681-4734680 Physcomitrium patens
Pp3c25_7150 2.0kb downstream 2.0kb downstream 6096 true Chr25: 4726585-4732680 Physcomitrium patens
Pp3c25_7150 2.0kb downstream 2.0kb downstream 2000 false Chr25: 4726585-4728584 Physcomitrium patens
Pp3c25_7150 5.0kb upstream 5.0kb upstream 9096 true Chr25: 4728585-4737680 Physcomitrium patens
Pp3c25_7150 5.0kb upstream 5.0kb upstream 5000 false Chr25: 4732681-4737680 Physcomitrium patens
Pp3c25_7150 5.0kb downstream 5.0kb downstream 9096 true Chr25: 4723585-4732680 Physcomitrium patens
Pp3c25_7150 5.0kb downstream 5.0kb downstream 5000 false Chr25: 4723585-4728584 Physcomitrium patens
Pp3c25_7150 10.0kb upstream 10.0kb upstream 14096 true Chr25: 4728585-4742680 Physcomitrium patens
Pp3c25_7150 10.0kb upstream 10.0kb upstream 10000 false Chr25: 4732681-4742680 Physcomitrium patens
Pp3c25_7150 10.0kb downstream 10.0kb downstream 14096 true Chr25: 4718585-4732680 Physcomitrium patens
Pp3c25_7150 10.0kb downstream 10.0kb downstream 10000 false Chr25: 4718585-4728584 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121335485 5274 Embryophyte Singleton cluster - no MSA
123427329 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.066        
cufflinks 0.203        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 0.826        
cufflinks 0.31        
cufflinks 0.077     Low  
cufflinks 0.368        
cufflinks 0.913        
cufflinks 0.64        
cufflinks 1.424       High
cufflinks 0.758        
cufflinks 0.605        
cufflinks 0.032     Low Low
cufflinks 0.168        
cufflinks 0.397        
cufflinks 0.183        
cufflinks 0.297        
cufflinks 2.183       High
cufflinks 0.381        
cufflinks 0.29        
cufflinks 0.007     Low Low
cufflinks 1.461       High
cufflinks 1.918       High
cufflinks 0.026     Low Low
cufflinks 0.181        
cufflinks 0.005     Low Low
cufflinks 0.341        
cufflinks 0.816        
cufflinks 0.544        

0 Strain