Gene : Pp3c26_6460 P. patens v3.3
Genomic Order:  306 Name:  ? Pp3c26_6460
Secondary Identifier:  ? PAC:32917105
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c26_6460 0.5kb upstream 0.5kb upstream 1877 true Chr26: 3495858-3497734 Physcomitrium patens
Pp3c26_6460 0.5kb upstream 0.5kb upstream 500 false Chr26: 3495858-3496357 Physcomitrium patens
Pp3c26_6460 0.5kb downstream 0.5kb downstream 1877 true Chr26: 3496358-3498234 Physcomitrium patens
Pp3c26_6460 0.5kb downstream 0.5kb downstream 500 false Chr26: 3497735-3498234 Physcomitrium patens
Pp3c26_6460 1.0kb upstream 1.0kb upstream 2377 true Chr26: 3495358-3497734 Physcomitrium patens
Pp3c26_6460 1.0kb upstream 1.0kb upstream 1000 false Chr26: 3495358-3496357 Physcomitrium patens
Pp3c26_6460 1.0kb downstream 1.0kb downstream 2377 true Chr26: 3496358-3498734 Physcomitrium patens
Pp3c26_6460 1.0kb downstream 1.0kb downstream 1000 false Chr26: 3497735-3498734 Physcomitrium patens
Pp3c26_6460 2.0kb upstream 2.0kb upstream 3377 true Chr26: 3494358-3497734 Physcomitrium patens
Pp3c26_6460 2.0kb upstream 2.0kb upstream 2000 false Chr26: 3494358-3496357 Physcomitrium patens
Pp3c26_6460 2.0kb downstream 2.0kb downstream 3377 true Chr26: 3496358-3499734 Physcomitrium patens
Pp3c26_6460 2.0kb downstream 2.0kb downstream 2000 false Chr26: 3497735-3499734 Physcomitrium patens
Pp3c26_6460 5.0kb upstream 5.0kb upstream 6377 true Chr26: 3491358-3497734 Physcomitrium patens
Pp3c26_6460 5.0kb upstream 5.0kb upstream 5000 false Chr26: 3491358-3496357 Physcomitrium patens
Pp3c26_6460 5.0kb downstream 5.0kb downstream 6377 true Chr26: 3496358-3502734 Physcomitrium patens
Pp3c26_6460 5.0kb downstream 5.0kb downstream 5000 false Chr26: 3497735-3502734 Physcomitrium patens
Pp3c26_6460 10.0kb upstream 10.0kb upstream 11377 true Chr26: 3486358-3497734 Physcomitrium patens
Pp3c26_6460 10.0kb upstream 10.0kb upstream 10000 false Chr26: 3486358-3496357 Physcomitrium patens
Pp3c26_6460 10.0kb downstream 10.0kb downstream 11377 true Chr26: 3496358-3507734 Physcomitrium patens
Pp3c26_6460 10.0kb downstream 10.0kb downstream 10000 false Chr26: 3497735-3507734 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121327242 5274 Embryophyte Singleton cluster - no MSA
123364271 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.159        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  

0 Strain