Gene : Pp3c26_8320 P. patens v3.3
Defline:  (1 of 12) 2.7.4.6 - Nucleoside-diphosphate kinase / Nucleoside diphosphokinase Genomic Order:  397
Name:  ? Pp3c26_8320 Secondary Identifier:  ? PAC:32917948
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Sequence Feature Displayer

Ontology Annotation Displayer

18 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens PWY0-162 Physcomitrium patens pathologic  
Ppatens PWY-6545 Physcomitrium patens pathologic  
Ppatens PWY-7176 Physcomitrium patens pathologic  
Ppatens PWY-7184 Physcomitrium patens pathologic  
Ppatens PWY-7196 Physcomitrium patens pathologic  
Ppatens PWY-7197 Physcomitrium patens pathologic  
Ppatens PWY-7200 Physcomitrium patens pathologic  
Ppatens PWY-7205 Physcomitrium patens pathologic  
Ppatens PWY-7208 Physcomitrium patens pathologic  
Ppatens PWY-7210 Physcomitrium patens pathologic  
Ppatens PWY-7211 Physcomitrium patens pathologic  
Ppatens PWY-7221 Physcomitrium patens pathologic  
Ppatens PWY-7224 Physcomitrium patens pathologic  
Ppatens PWY-7226 Physcomitrium patens pathologic  
Ppatens PWY-7227 Physcomitrium patens pathologic  
Ppatens PWY-7228 Physcomitrium patens pathologic  
Ppatens PWY-7229 Physcomitrium patens pathologic  
Ppatens PWY-841 Physcomitrium patens pathologic  

Genomics

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Expression

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7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c26_8320 0.5kb upstream 0.5kb upstream 6637 true Chr26: 4799104-4805740 Physcomitrium patens
Pp3c26_8320 0.5kb upstream 0.5kb upstream 500 false Chr26: 4805241-4805740 Physcomitrium patens
Pp3c26_8320 0.5kb downstream 0.5kb downstream 6637 true Chr26: 4798604-4805240 Physcomitrium patens
Pp3c26_8320 0.5kb downstream 0.5kb downstream 500 false Chr26: 4798604-4799103 Physcomitrium patens
Pp3c26_8320 1.0kb upstream 1.0kb upstream 7137 true Chr26: 4799104-4806240 Physcomitrium patens
Pp3c26_8320 1.0kb upstream 1.0kb upstream 1000 false Chr26: 4805241-4806240 Physcomitrium patens
Pp3c26_8320 1.0kb downstream 1.0kb downstream 7137 true Chr26: 4798104-4805240 Physcomitrium patens
Pp3c26_8320 1.0kb downstream 1.0kb downstream 1000 false Chr26: 4798104-4799103 Physcomitrium patens
Pp3c26_8320 2.0kb upstream 2.0kb upstream 8137 true Chr26: 4799104-4807240 Physcomitrium patens
Pp3c26_8320 2.0kb upstream 2.0kb upstream 2000 false Chr26: 4805241-4807240 Physcomitrium patens
Pp3c26_8320 2.0kb downstream 2.0kb downstream 8137 true Chr26: 4797104-4805240 Physcomitrium patens
Pp3c26_8320 2.0kb downstream 2.0kb downstream 2000 false Chr26: 4797104-4799103 Physcomitrium patens
Pp3c26_8320 5.0kb upstream 5.0kb upstream 11137 true Chr26: 4799104-4810240 Physcomitrium patens
Pp3c26_8320 5.0kb upstream 5.0kb upstream 5000 false Chr26: 4805241-4810240 Physcomitrium patens
Pp3c26_8320 5.0kb downstream 5.0kb downstream 11137 true Chr26: 4794104-4805240 Physcomitrium patens
Pp3c26_8320 5.0kb downstream 5.0kb downstream 5000 false Chr26: 4794104-4799103 Physcomitrium patens
Pp3c26_8320 10.0kb upstream 10.0kb upstream 16137 true Chr26: 4799104-4815240 Physcomitrium patens
Pp3c26_8320 10.0kb upstream 10.0kb upstream 10000 false Chr26: 4805241-4815240 Physcomitrium patens
Pp3c26_8320 10.0kb downstream 10.0kb downstream 16137 true Chr26: 4789104-4805240 Physcomitrium patens
Pp3c26_8320 10.0kb downstream 10.0kb downstream 10000 false Chr26: 4789104-4799103 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123428962 5275 Viridiplantae View MSA
121343374 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.017     Low  
cufflinks 0.008     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.008     Low  
cufflinks 0.028     Low  
cufflinks 0.204       High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain