Gene : Pp3c26_11180 P. patens v3.3
Defline:  (1 of 3) PF03350 - Uncharacterized protein family, UPF0114 (UPF0114) Genomic Order:  510
Name:  ? Pp3c26_11180 Secondary Identifier:  ? PAC:32917972
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

11 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c26_11180 0.5kb upstream 0.5kb upstream 3071 true Chr26: 7032025-7035095 Physcomitrium patens
Pp3c26_11180 0.5kb upstream 0.5kb upstream 500 false Chr26: 7032025-7032524 Physcomitrium patens
Pp3c26_11180 0.5kb downstream 0.5kb downstream 3071 true Chr26: 7032525-7035595 Physcomitrium patens
Pp3c26_11180 0.5kb downstream 0.5kb downstream 500 false Chr26: 7035096-7035595 Physcomitrium patens
Pp3c26_11180 1.0kb upstream 1.0kb upstream 3571 true Chr26: 7031525-7035095 Physcomitrium patens
Pp3c26_11180 1.0kb upstream 1.0kb upstream 1000 false Chr26: 7031525-7032524 Physcomitrium patens
Pp3c26_11180 1.0kb downstream 1.0kb downstream 3571 true Chr26: 7032525-7036095 Physcomitrium patens
Pp3c26_11180 1.0kb downstream 1.0kb downstream 1000 false Chr26: 7035096-7036095 Physcomitrium patens
Pp3c26_11180 2.0kb upstream 2.0kb upstream 4571 true Chr26: 7030525-7035095 Physcomitrium patens
Pp3c26_11180 2.0kb upstream 2.0kb upstream 2000 false Chr26: 7030525-7032524 Physcomitrium patens
Pp3c26_11180 2.0kb downstream 2.0kb downstream 4571 true Chr26: 7032525-7037095 Physcomitrium patens
Pp3c26_11180 2.0kb downstream 2.0kb downstream 2000 false Chr26: 7035096-7037095 Physcomitrium patens
Pp3c26_11180 5.0kb upstream 5.0kb upstream 7571 true Chr26: 7027525-7035095 Physcomitrium patens
Pp3c26_11180 5.0kb upstream 5.0kb upstream 5000 false Chr26: 7027525-7032524 Physcomitrium patens
Pp3c26_11180 5.0kb downstream 5.0kb downstream 7571 true Chr26: 7032525-7040095 Physcomitrium patens
Pp3c26_11180 5.0kb downstream 5.0kb downstream 5000 false Chr26: 7035096-7040095 Physcomitrium patens
Pp3c26_11180 10.0kb upstream 10.0kb upstream 12571 true Chr26: 7022525-7035095 Physcomitrium patens
Pp3c26_11180 10.0kb upstream 10.0kb upstream 10000 false Chr26: 7022525-7032524 Physcomitrium patens
Pp3c26_11180 10.0kb downstream 10.0kb downstream 12571 true Chr26: 7032525-7045095 Physcomitrium patens
Pp3c26_11180 10.0kb downstream 10.0kb downstream 10000 false Chr26: 7035096-7045095 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348495 5274 Embryophyte View MSA
123426050 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.417     High  
cufflinks 15.948       Low
cufflinks 245.053     High  
cufflinks 170.499     High  
cufflinks 142.779     High  
cufflinks 144.457     High  
cufflinks 1.644       Low
cufflinks 270.048     High  
cufflinks 167.276     High  
cufflinks 24.886     High  
cufflinks 68.028     High  
cufflinks 192.436     High  
cufflinks 192.497     High  
cufflinks 141.495     High  
cufflinks 104.225     High  
cufflinks 25.092     High  
cufflinks 124.011     High  
cufflinks 32.618     High  
cufflinks 120.763     High  
cufflinks 163.19     High  
cufflinks 169.046     High  
cufflinks 74.808     High  
cufflinks 149.16     High  
cufflinks 88.447     High  
cufflinks 1.197       Low
cufflinks 75.358     High  
cufflinks 201.938     High  
cufflinks 184.293     High  
cufflinks 94.313     High  
cufflinks 34.993     High  

0 Strain