Gene : Pp3c26_1130 P. patens v3.3
Defline:  (1 of 1) PTHR11889 - HEDGEHOG Genomic Order:  61
Name:  ? Pp3c26_1130 Secondary Identifier:  ? PAC:32918248
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0 Pathways

Genomics

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Expression

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7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c26_1130 0.5kb upstream 0.5kb upstream 3725 true Chr26: 397448-401172 Physcomitrium patens
Pp3c26_1130 0.5kb upstream 0.5kb upstream 500 false Chr26: 397448-397947 Physcomitrium patens
Pp3c26_1130 0.5kb downstream 0.5kb downstream 3725 true Chr26: 397948-401672 Physcomitrium patens
Pp3c26_1130 0.5kb downstream 0.5kb downstream 500 false Chr26: 401173-401672 Physcomitrium patens
Pp3c26_1130 1.0kb upstream 1.0kb upstream 4225 true Chr26: 396948-401172 Physcomitrium patens
Pp3c26_1130 1.0kb upstream 1.0kb upstream 1000 false Chr26: 396948-397947 Physcomitrium patens
Pp3c26_1130 1.0kb downstream 1.0kb downstream 4225 true Chr26: 397948-402172 Physcomitrium patens
Pp3c26_1130 1.0kb downstream 1.0kb downstream 1000 false Chr26: 401173-402172 Physcomitrium patens
Pp3c26_1130 2.0kb upstream 2.0kb upstream 5225 true Chr26: 395948-401172 Physcomitrium patens
Pp3c26_1130 2.0kb upstream 2.0kb upstream 2000 false Chr26: 395948-397947 Physcomitrium patens
Pp3c26_1130 2.0kb downstream 2.0kb downstream 5225 true Chr26: 397948-403172 Physcomitrium patens
Pp3c26_1130 2.0kb downstream 2.0kb downstream 2000 false Chr26: 401173-403172 Physcomitrium patens
Pp3c26_1130 5.0kb upstream 5.0kb upstream 8225 true Chr26: 392948-401172 Physcomitrium patens
Pp3c26_1130 5.0kb upstream 5.0kb upstream 5000 false Chr26: 392948-397947 Physcomitrium patens
Pp3c26_1130 5.0kb downstream 5.0kb downstream 8225 true Chr26: 397948-406172 Physcomitrium patens
Pp3c26_1130 5.0kb downstream 5.0kb downstream 5000 false Chr26: 401173-406172 Physcomitrium patens
Pp3c26_1130 10.0kb upstream 10.0kb upstream 13225 true Chr26: 387948-401172 Physcomitrium patens
Pp3c26_1130 10.0kb upstream 10.0kb upstream 10000 false Chr26: 387948-397947 Physcomitrium patens
Pp3c26_1130 10.0kb downstream 10.0kb downstream 13225 true Chr26: 397948-411172 Physcomitrium patens
Pp3c26_1130 10.0kb downstream 10.0kb downstream 10000 false Chr26: 401173-411172 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121322765 5274 Embryophyte View MSA
123359836 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.005     Low  
cufflinks 0.001     Low Low
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.011     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.053     Low High
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.001     Low Low
cufflinks 0.001     Low Low
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.004     Low  
cufflinks 0.001     Low Low

0 Strain