Gene : Pp3c27_2730 P. patens v3.3
Defline:  (1 of 2) PF00072//PF00512//PF02518//PF08447 - Response regulator receiver domain (Response_reg) // His Kinase A (phospho-acceptor) domain (HisKA) // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) // PAS fold (PAS_3) Genomic Order:  132
Name:  ? Pp3c27_2730 Secondary Identifier:  ? PAC:32952403
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c27_2730 0.5kb upstream 0.5kb upstream 8036 true Chr27: 1521449-1529484 Physcomitrium patens
Pp3c27_2730 0.5kb upstream 0.5kb upstream 500 false Chr27: 1528985-1529484 Physcomitrium patens
Pp3c27_2730 0.5kb downstream 0.5kb downstream 8036 true Chr27: 1520949-1528984 Physcomitrium patens
Pp3c27_2730 0.5kb downstream 0.5kb downstream 500 false Chr27: 1520949-1521448 Physcomitrium patens
Pp3c27_2730 1.0kb upstream 1.0kb upstream 8536 true Chr27: 1521449-1529984 Physcomitrium patens
Pp3c27_2730 1.0kb upstream 1.0kb upstream 1000 false Chr27: 1528985-1529984 Physcomitrium patens
Pp3c27_2730 1.0kb downstream 1.0kb downstream 8536 true Chr27: 1520449-1528984 Physcomitrium patens
Pp3c27_2730 1.0kb downstream 1.0kb downstream 1000 false Chr27: 1520449-1521448 Physcomitrium patens
Pp3c27_2730 2.0kb upstream 2.0kb upstream 9536 true Chr27: 1521449-1530984 Physcomitrium patens
Pp3c27_2730 2.0kb upstream 2.0kb upstream 2000 false Chr27: 1528985-1530984 Physcomitrium patens
Pp3c27_2730 2.0kb downstream 2.0kb downstream 9536 true Chr27: 1519449-1528984 Physcomitrium patens
Pp3c27_2730 2.0kb downstream 2.0kb downstream 2000 false Chr27: 1519449-1521448 Physcomitrium patens
Pp3c27_2730 5.0kb upstream 5.0kb upstream 12536 true Chr27: 1521449-1533984 Physcomitrium patens
Pp3c27_2730 5.0kb upstream 5.0kb upstream 5000 false Chr27: 1528985-1533984 Physcomitrium patens
Pp3c27_2730 5.0kb downstream 5.0kb downstream 12536 true Chr27: 1516449-1528984 Physcomitrium patens
Pp3c27_2730 5.0kb downstream 5.0kb downstream 5000 false Chr27: 1516449-1521448 Physcomitrium patens
Pp3c27_2730 10.0kb upstream 10.0kb upstream 17536 true Chr27: 1521449-1538984 Physcomitrium patens
Pp3c27_2730 10.0kb upstream 10.0kb upstream 10000 false Chr27: 1528985-1538984 Physcomitrium patens
Pp3c27_2730 10.0kb downstream 10.0kb downstream 17536 true Chr27: 1511449-1528984 Physcomitrium patens
Pp3c27_2730 10.0kb downstream 10.0kb downstream 10000 false Chr27: 1511449-1521448 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343221 5274 Embryophyte View MSA
123427331 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.597        
cufflinks 1.241        
cufflinks 3.683        
cufflinks 2.472        
cufflinks 2.143        
cufflinks 1.536        
cufflinks 0.656        
cufflinks 1.603        
cufflinks 0.253       Low
cufflinks 1.73        
cufflinks 1.581        
cufflinks 0.011     Low Low
cufflinks 1.493        
cufflinks 2.906        
cufflinks 0.86        
cufflinks 3.349        
cufflinks 1.09        
cufflinks 1.675        
cufflinks 0.021     Low Low
cufflinks 1.881        
cufflinks 2.07        
cufflinks 2.285        
cufflinks 1.699        
cufflinks 1.45        
cufflinks 0.99        
cufflinks 0.26       Low
cufflinks 1.952        
cufflinks 1.691        
cufflinks 1.635        
cufflinks 0.732        

0 Strain