Gene : Pp3s30_480 P. patens v3.3
Defline:  (1 of 1) PF12729 - Four helix bundle sensory module for signal transduction (4HB_MCP_1) Genomic Order:  52
Name:  ? Pp3s30_480 Secondary Identifier:  ? PAC:32948495
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s30_480 0.5kb upstream 0.5kb upstream 1925 true scaffold_30: 136600-138524 Physcomitrium patens
Pp3s30_480 0.5kb upstream 0.5kb upstream 500 false scaffold_30: 136600-137099 Physcomitrium patens
Pp3s30_480 0.5kb downstream 0.5kb downstream 1925 true scaffold_30: 137100-139024 Physcomitrium patens
Pp3s30_480 0.5kb downstream 0.5kb downstream 500 false scaffold_30: 138525-139024 Physcomitrium patens
Pp3s30_480 1.0kb upstream 1.0kb upstream 2425 true scaffold_30: 136100-138524 Physcomitrium patens
Pp3s30_480 1.0kb upstream 1.0kb upstream 1000 false scaffold_30: 136100-137099 Physcomitrium patens
Pp3s30_480 1.0kb downstream 1.0kb downstream 2425 true scaffold_30: 137100-139524 Physcomitrium patens
Pp3s30_480 1.0kb downstream 1.0kb downstream 1000 false scaffold_30: 138525-139524 Physcomitrium patens
Pp3s30_480 2.0kb upstream 2.0kb upstream 3425 true scaffold_30: 135100-138524 Physcomitrium patens
Pp3s30_480 2.0kb upstream 2.0kb upstream 2000 false scaffold_30: 135100-137099 Physcomitrium patens
Pp3s30_480 2.0kb downstream 2.0kb downstream 3425 true scaffold_30: 137100-140524 Physcomitrium patens
Pp3s30_480 2.0kb downstream 2.0kb downstream 2000 false scaffold_30: 138525-140524 Physcomitrium patens
Pp3s30_480 5.0kb upstream 5.0kb upstream 6425 true scaffold_30: 132100-138524 Physcomitrium patens
Pp3s30_480 5.0kb upstream 5.0kb upstream 5000 false scaffold_30: 132100-137099 Physcomitrium patens
Pp3s30_480 5.0kb downstream 5.0kb downstream 6425 true scaffold_30: 137100-143524 Physcomitrium patens
Pp3s30_480 5.0kb downstream 5.0kb downstream 5000 false scaffold_30: 138525-143524 Physcomitrium patens
Pp3s30_480 10.0kb upstream 10.0kb upstream 11425 true scaffold_30: 127100-138524 Physcomitrium patens
Pp3s30_480 10.0kb upstream 10.0kb upstream 10000 false scaffold_30: 127100-137099 Physcomitrium patens
Pp3s30_480 10.0kb downstream 10.0kb downstream 11425 true scaffold_30: 137100-148524 Physcomitrium patens
Pp3s30_480 10.0kb downstream 10.0kb downstream 10000 false scaffold_30: 138525-148524 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331452 5274 Embryophyte Singleton cluster - no MSA
123368383 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain