Gene : Pp3s30_50 P. patens v3.3
Defline:  (1 of 2) 2.7.1.69 - Protein-N(pi)-phosphohistidine--sugar phosphotransferase / PTS permease Genomic Order:  3
Name:  ? Pp3s30_50 Secondary Identifier:  ? PAC:32948458
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s30_50 0.5kb upstream 0.5kb upstream 776 true scaffold_30: 2955-3730 Physcomitrium patens
Pp3s30_50 0.5kb upstream 0.5kb upstream 500 false scaffold_30: 3231-3730 Physcomitrium patens
Pp3s30_50 0.5kb downstream 0.5kb downstream 776 true scaffold_30: 2455-3230 Physcomitrium patens
Pp3s30_50 0.5kb downstream 0.5kb downstream 500 false scaffold_30: 2455-2954 Physcomitrium patens
Pp3s30_50 1.0kb upstream 1.0kb upstream 1276 true scaffold_30: 2955-4230 Physcomitrium patens
Pp3s30_50 1.0kb upstream 1.0kb upstream 1000 false scaffold_30: 3231-4230 Physcomitrium patens
Pp3s30_50 1.0kb downstream 1.0kb downstream 1276 true scaffold_30: 1955-3230 Physcomitrium patens
Pp3s30_50 1.0kb downstream 1.0kb downstream 1000 false scaffold_30: 1955-2954 Physcomitrium patens
Pp3s30_50 2.0kb upstream 2.0kb upstream 2276 true scaffold_30: 2955-5230 Physcomitrium patens
Pp3s30_50 2.0kb upstream 2.0kb upstream 2000 false scaffold_30: 3231-5230 Physcomitrium patens
Pp3s30_50 2.0kb downstream 2.0kb downstream 2276 true scaffold_30: 955-3230 Physcomitrium patens
Pp3s30_50 2.0kb downstream 2.0kb downstream 2000 false scaffold_30: 955-2954 Physcomitrium patens
Pp3s30_50 5.0kb upstream 5.0kb upstream 5276 true scaffold_30: 2955-8230 Physcomitrium patens
Pp3s30_50 5.0kb upstream 5.0kb upstream 5000 false scaffold_30: 3231-8230 Physcomitrium patens
Pp3s30_50 5.0kb downstream 5.0kb downstream 3230 true scaffold_30: 1-3230 Physcomitrium patens
Pp3s30_50 5.0kb downstream 5.0kb downstream 2954 false scaffold_30: 1-2954 Physcomitrium patens
Pp3s30_50 10.0kb upstream 10.0kb upstream 10276 true scaffold_30: 2955-13230 Physcomitrium patens
Pp3s30_50 10.0kb upstream 10.0kb upstream 10000 false scaffold_30: 3231-13230 Physcomitrium patens
Pp3s30_50 10.0kb downstream 10.0kb downstream 3230 true scaffold_30: 1-3230 Physcomitrium patens
Pp3s30_50 10.0kb downstream 10.0kb downstream 2954 false scaffold_30: 1-2954 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331424 5274 Embryophyte Singleton cluster - no MSA
123368357 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain