Gene : Pp3s30_515 P. patens v3.3
Defline:  (1 of 1) PTHR30055//PTHR30055:SF44 - HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR Genomic Order:  54
Name:  ? Pp3s30_515 Secondary Identifier:  ? PAC:32948514
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s30_515 0.5kb upstream 0.5kb upstream 1079 true scaffold_30: 141733-142811 Physcomitrium patens
Pp3s30_515 0.5kb upstream 0.5kb upstream 500 false scaffold_30: 142312-142811 Physcomitrium patens
Pp3s30_515 0.5kb downstream 0.5kb downstream 1079 true scaffold_30: 141233-142311 Physcomitrium patens
Pp3s30_515 0.5kb downstream 0.5kb downstream 500 false scaffold_30: 141233-141732 Physcomitrium patens
Pp3s30_515 1.0kb upstream 1.0kb upstream 1579 true scaffold_30: 141733-143311 Physcomitrium patens
Pp3s30_515 1.0kb upstream 1.0kb upstream 1000 false scaffold_30: 142312-143311 Physcomitrium patens
Pp3s30_515 1.0kb downstream 1.0kb downstream 1579 true scaffold_30: 140733-142311 Physcomitrium patens
Pp3s30_515 1.0kb downstream 1.0kb downstream 1000 false scaffold_30: 140733-141732 Physcomitrium patens
Pp3s30_515 2.0kb upstream 2.0kb upstream 2579 true scaffold_30: 141733-144311 Physcomitrium patens
Pp3s30_515 2.0kb upstream 2.0kb upstream 2000 false scaffold_30: 142312-144311 Physcomitrium patens
Pp3s30_515 2.0kb downstream 2.0kb downstream 2579 true scaffold_30: 139733-142311 Physcomitrium patens
Pp3s30_515 2.0kb downstream 2.0kb downstream 2000 false scaffold_30: 139733-141732 Physcomitrium patens
Pp3s30_515 5.0kb upstream 5.0kb upstream 5579 true scaffold_30: 141733-147311 Physcomitrium patens
Pp3s30_515 5.0kb upstream 5.0kb upstream 5000 false scaffold_30: 142312-147311 Physcomitrium patens
Pp3s30_515 5.0kb downstream 5.0kb downstream 5579 true scaffold_30: 136733-142311 Physcomitrium patens
Pp3s30_515 5.0kb downstream 5.0kb downstream 5000 false scaffold_30: 136733-141732 Physcomitrium patens
Pp3s30_515 10.0kb upstream 10.0kb upstream 10579 true scaffold_30: 141733-152311 Physcomitrium patens
Pp3s30_515 10.0kb upstream 10.0kb upstream 10000 false scaffold_30: 142312-152311 Physcomitrium patens
Pp3s30_515 10.0kb downstream 10.0kb downstream 10579 true scaffold_30: 131733-142311 Physcomitrium patens
Pp3s30_515 10.0kb downstream 10.0kb downstream 10000 false scaffold_30: 131733-141732 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
120851055 5274 Embryophyte View MSA
122892250 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain