Gene : Pp3s30_150 P. patens v3.3
Defline:  (1 of 1) PF05977//PF07690 - Transmembrane secretion effector (MFS_3) // Major Facilitator Superfamily (MFS_1) Genomic Order:  17
Name:  ? Pp3s30_150 Secondary Identifier:  ? PAC:32948550
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s30_150 0.5kb upstream 0.5kb upstream 1805 true scaffold_30: 36148-37952 Physcomitrium patens
Pp3s30_150 0.5kb upstream 0.5kb upstream 500 false scaffold_30: 37453-37952 Physcomitrium patens
Pp3s30_150 0.5kb downstream 0.5kb downstream 1805 true scaffold_30: 35648-37452 Physcomitrium patens
Pp3s30_150 0.5kb downstream 0.5kb downstream 500 false scaffold_30: 35648-36147 Physcomitrium patens
Pp3s30_150 1.0kb upstream 1.0kb upstream 2305 true scaffold_30: 36148-38452 Physcomitrium patens
Pp3s30_150 1.0kb upstream 1.0kb upstream 1000 false scaffold_30: 37453-38452 Physcomitrium patens
Pp3s30_150 1.0kb downstream 1.0kb downstream 2305 true scaffold_30: 35148-37452 Physcomitrium patens
Pp3s30_150 1.0kb downstream 1.0kb downstream 1000 false scaffold_30: 35148-36147 Physcomitrium patens
Pp3s30_150 2.0kb upstream 2.0kb upstream 3305 true scaffold_30: 36148-39452 Physcomitrium patens
Pp3s30_150 2.0kb upstream 2.0kb upstream 2000 false scaffold_30: 37453-39452 Physcomitrium patens
Pp3s30_150 2.0kb downstream 2.0kb downstream 3305 true scaffold_30: 34148-37452 Physcomitrium patens
Pp3s30_150 2.0kb downstream 2.0kb downstream 2000 false scaffold_30: 34148-36147 Physcomitrium patens
Pp3s30_150 5.0kb upstream 5.0kb upstream 6305 true scaffold_30: 36148-42452 Physcomitrium patens
Pp3s30_150 5.0kb upstream 5.0kb upstream 5000 false scaffold_30: 37453-42452 Physcomitrium patens
Pp3s30_150 5.0kb downstream 5.0kb downstream 6305 true scaffold_30: 31148-37452 Physcomitrium patens
Pp3s30_150 5.0kb downstream 5.0kb downstream 5000 false scaffold_30: 31148-36147 Physcomitrium patens
Pp3s30_150 10.0kb upstream 10.0kb upstream 11305 true scaffold_30: 36148-47452 Physcomitrium patens
Pp3s30_150 10.0kb upstream 10.0kb upstream 10000 false scaffold_30: 37453-47452 Physcomitrium patens
Pp3s30_150 10.0kb downstream 10.0kb downstream 11305 true scaffold_30: 26148-37452 Physcomitrium patens
Pp3s30_150 10.0kb downstream 10.0kb downstream 10000 false scaffold_30: 26148-36147 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331493 5274 Embryophyte Singleton cluster - no MSA
123368422 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain