Gene : Pp3s32_260 P. patens v3.3
Defline:  (1 of 1) PF01371 - Trp repressor protein (Trp_repressor) Genomic Order:  25
Name:  ? Pp3s32_260 Secondary Identifier:  ? PAC:32948413
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s32_260 0.5kb upstream 0.5kb upstream 7844 true scaffold_32: 86317-94160 Physcomitrium patens
Pp3s32_260 0.5kb upstream 0.5kb upstream 500 false scaffold_32: 86317-86816 Physcomitrium patens
Pp3s32_260 0.5kb downstream 0.5kb downstream 7844 true scaffold_32: 86817-94660 Physcomitrium patens
Pp3s32_260 0.5kb downstream 0.5kb downstream 500 false scaffold_32: 94161-94660 Physcomitrium patens
Pp3s32_260 1.0kb upstream 1.0kb upstream 8344 true scaffold_32: 85817-94160 Physcomitrium patens
Pp3s32_260 1.0kb upstream 1.0kb upstream 1000 false scaffold_32: 85817-86816 Physcomitrium patens
Pp3s32_260 1.0kb downstream 1.0kb downstream 8344 true scaffold_32: 86817-95160 Physcomitrium patens
Pp3s32_260 1.0kb downstream 1.0kb downstream 1000 false scaffold_32: 94161-95160 Physcomitrium patens
Pp3s32_260 2.0kb upstream 2.0kb upstream 9344 true scaffold_32: 84817-94160 Physcomitrium patens
Pp3s32_260 2.0kb upstream 2.0kb upstream 2000 false scaffold_32: 84817-86816 Physcomitrium patens
Pp3s32_260 2.0kb downstream 2.0kb downstream 9344 true scaffold_32: 86817-96160 Physcomitrium patens
Pp3s32_260 2.0kb downstream 2.0kb downstream 2000 false scaffold_32: 94161-96160 Physcomitrium patens
Pp3s32_260 5.0kb upstream 5.0kb upstream 12344 true scaffold_32: 81817-94160 Physcomitrium patens
Pp3s32_260 5.0kb upstream 5.0kb upstream 5000 false scaffold_32: 81817-86816 Physcomitrium patens
Pp3s32_260 5.0kb downstream 5.0kb downstream 12344 true scaffold_32: 86817-99160 Physcomitrium patens
Pp3s32_260 5.0kb downstream 5.0kb downstream 5000 false scaffold_32: 94161-99160 Physcomitrium patens
Pp3s32_260 10.0kb upstream 10.0kb upstream 17344 true scaffold_32: 76817-94160 Physcomitrium patens
Pp3s32_260 10.0kb upstream 10.0kb upstream 10000 false scaffold_32: 76817-86816 Physcomitrium patens
Pp3s32_260 10.0kb downstream 10.0kb downstream 17344 true scaffold_32: 86817-104160 Physcomitrium patens
Pp3s32_260 10.0kb downstream 10.0kb downstream 10000 false scaffold_32: 94161-104160 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331391 5274 Embryophyte Singleton cluster - no MSA
123368327 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain