Gene : Pp3s32_480 P. patens v3.3
Defline:  (1 of 1) PTHR11751//PTHR11751:SF417 - SUBGROUP I AMINOTRANSFERASE RELATED Genomic Order:  50
Name:  ? Pp3s32_480 Secondary Identifier:  ? PAC:32948357
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens PWY-5864 Physcomitrium patens pathologic  
Ppatens PWY-5886 Physcomitrium patens pathologic  
Ppatens TYRFUMCAT-PWY Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s32_480 0.5kb upstream 0.5kb upstream 8518 true scaffold_32: 176089-184606 Physcomitrium patens
Pp3s32_480 0.5kb upstream 0.5kb upstream 500 false scaffold_32: 184107-184606 Physcomitrium patens
Pp3s32_480 0.5kb downstream 0.5kb downstream 8518 true scaffold_32: 175589-184106 Physcomitrium patens
Pp3s32_480 0.5kb downstream 0.5kb downstream 500 false scaffold_32: 175589-176088 Physcomitrium patens
Pp3s32_480 1.0kb upstream 1.0kb upstream 9018 true scaffold_32: 176089-185106 Physcomitrium patens
Pp3s32_480 1.0kb upstream 1.0kb upstream 1000 false scaffold_32: 184107-185106 Physcomitrium patens
Pp3s32_480 1.0kb downstream 1.0kb downstream 9018 true scaffold_32: 175089-184106 Physcomitrium patens
Pp3s32_480 1.0kb downstream 1.0kb downstream 1000 false scaffold_32: 175089-176088 Physcomitrium patens
Pp3s32_480 2.0kb upstream 2.0kb upstream 10018 true scaffold_32: 176089-186106 Physcomitrium patens
Pp3s32_480 2.0kb upstream 2.0kb upstream 2000 false scaffold_32: 184107-186106 Physcomitrium patens
Pp3s32_480 2.0kb downstream 2.0kb downstream 10018 true scaffold_32: 174089-184106 Physcomitrium patens
Pp3s32_480 2.0kb downstream 2.0kb downstream 2000 false scaffold_32: 174089-176088 Physcomitrium patens
Pp3s32_480 5.0kb upstream 5.0kb upstream 13018 true scaffold_32: 176089-189106 Physcomitrium patens
Pp3s32_480 5.0kb upstream 5.0kb upstream 5000 false scaffold_32: 184107-189106 Physcomitrium patens
Pp3s32_480 5.0kb downstream 5.0kb downstream 13018 true scaffold_32: 171089-184106 Physcomitrium patens
Pp3s32_480 5.0kb downstream 5.0kb downstream 5000 false scaffold_32: 171089-176088 Physcomitrium patens
Pp3s32_480 10.0kb upstream 10.0kb upstream 18018 true scaffold_32: 176089-194106 Physcomitrium patens
Pp3s32_480 10.0kb upstream 10.0kb upstream 10000 false scaffold_32: 184107-194106 Physcomitrium patens
Pp3s32_480 10.0kb downstream 10.0kb downstream 18018 true scaffold_32: 166089-184106 Physcomitrium patens
Pp3s32_480 10.0kb downstream 10.0kb downstream 10000 false scaffold_32: 166089-176088 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331355 5274 Embryophyte Singleton cluster - no MSA
123368292 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain