Gene : Pp3s30_340 P. patens v3.3
Defline:  (1 of 1) PTHR26402//PTHR26402:SF50 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM Genomic Order:  37
Name:  ? Pp3s30_340 Secondary Identifier:  ? PAC:32948538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s30_340 0.5kb upstream 0.5kb upstream 2654 true scaffold_30: 72967-75620 Physcomitrium patens
Pp3s30_340 0.5kb upstream 0.5kb upstream 500 false scaffold_30: 75121-75620 Physcomitrium patens
Pp3s30_340 0.5kb downstream 0.5kb downstream 2654 true scaffold_30: 72467-75120 Physcomitrium patens
Pp3s30_340 0.5kb downstream 0.5kb downstream 500 false scaffold_30: 72467-72966 Physcomitrium patens
Pp3s30_340 1.0kb upstream 1.0kb upstream 3154 true scaffold_30: 72967-76120 Physcomitrium patens
Pp3s30_340 1.0kb upstream 1.0kb upstream 1000 false scaffold_30: 75121-76120 Physcomitrium patens
Pp3s30_340 1.0kb downstream 1.0kb downstream 3154 true scaffold_30: 71967-75120 Physcomitrium patens
Pp3s30_340 1.0kb downstream 1.0kb downstream 1000 false scaffold_30: 71967-72966 Physcomitrium patens
Pp3s30_340 2.0kb upstream 2.0kb upstream 4154 true scaffold_30: 72967-77120 Physcomitrium patens
Pp3s30_340 2.0kb upstream 2.0kb upstream 2000 false scaffold_30: 75121-77120 Physcomitrium patens
Pp3s30_340 2.0kb downstream 2.0kb downstream 4154 true scaffold_30: 70967-75120 Physcomitrium patens
Pp3s30_340 2.0kb downstream 2.0kb downstream 2000 false scaffold_30: 70967-72966 Physcomitrium patens
Pp3s30_340 5.0kb upstream 5.0kb upstream 7154 true scaffold_30: 72967-80120 Physcomitrium patens
Pp3s30_340 5.0kb upstream 5.0kb upstream 5000 false scaffold_30: 75121-80120 Physcomitrium patens
Pp3s30_340 5.0kb downstream 5.0kb downstream 7154 true scaffold_30: 67967-75120 Physcomitrium patens
Pp3s30_340 5.0kb downstream 5.0kb downstream 5000 false scaffold_30: 67967-72966 Physcomitrium patens
Pp3s30_340 10.0kb upstream 10.0kb upstream 12154 true scaffold_30: 72967-85120 Physcomitrium patens
Pp3s30_340 10.0kb upstream 10.0kb upstream 10000 false scaffold_30: 75121-85120 Physcomitrium patens
Pp3s30_340 10.0kb downstream 10.0kb downstream 12154 true scaffold_30: 62967-75120 Physcomitrium patens
Pp3s30_340 10.0kb downstream 10.0kb downstream 10000 false scaffold_30: 62967-72966 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121336456 5274 Embryophyte View MSA
123373283 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain