Gene : Pp3s30_70 P. patens v3.3
Defline:  (1 of 1) PTHR24423//PTHR24423:SF551 - TWO-COMPONENT SENSOR HISTIDINE KINASE Genomic Order:  5
Name:  ? Pp3s30_70 Secondary Identifier:  ? PAC:32948429
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s30_70 0.5kb upstream 0.5kb upstream 6667 true scaffold_30: 5662-12328 Physcomitrium patens
Pp3s30_70 0.5kb upstream 0.5kb upstream 500 false scaffold_30: 11829-12328 Physcomitrium patens
Pp3s30_70 0.5kb downstream 0.5kb downstream 6667 true scaffold_30: 5162-11828 Physcomitrium patens
Pp3s30_70 0.5kb downstream 0.5kb downstream 500 false scaffold_30: 5162-5661 Physcomitrium patens
Pp3s30_70 1.0kb upstream 1.0kb upstream 7167 true scaffold_30: 5662-12828 Physcomitrium patens
Pp3s30_70 1.0kb upstream 1.0kb upstream 1000 false scaffold_30: 11829-12828 Physcomitrium patens
Pp3s30_70 1.0kb downstream 1.0kb downstream 7167 true scaffold_30: 4662-11828 Physcomitrium patens
Pp3s30_70 1.0kb downstream 1.0kb downstream 1000 false scaffold_30: 4662-5661 Physcomitrium patens
Pp3s30_70 2.0kb upstream 2.0kb upstream 8167 true scaffold_30: 5662-13828 Physcomitrium patens
Pp3s30_70 2.0kb upstream 2.0kb upstream 2000 false scaffold_30: 11829-13828 Physcomitrium patens
Pp3s30_70 2.0kb downstream 2.0kb downstream 8167 true scaffold_30: 3662-11828 Physcomitrium patens
Pp3s30_70 2.0kb downstream 2.0kb downstream 2000 false scaffold_30: 3662-5661 Physcomitrium patens
Pp3s30_70 5.0kb upstream 5.0kb upstream 11167 true scaffold_30: 5662-16828 Physcomitrium patens
Pp3s30_70 5.0kb upstream 5.0kb upstream 5000 false scaffold_30: 11829-16828 Physcomitrium patens
Pp3s30_70 5.0kb downstream 5.0kb downstream 11167 true scaffold_30: 662-11828 Physcomitrium patens
Pp3s30_70 5.0kb downstream 5.0kb downstream 5000 false scaffold_30: 662-5661 Physcomitrium patens
Pp3s30_70 10.0kb upstream 10.0kb upstream 16167 true scaffold_30: 5662-21828 Physcomitrium patens
Pp3s30_70 10.0kb upstream 10.0kb upstream 10000 false scaffold_30: 11829-21828 Physcomitrium patens
Pp3s30_70 10.0kb downstream 10.0kb downstream 11828 true scaffold_30: 1-11828 Physcomitrium patens
Pp3s30_70 10.0kb downstream 10.0kb downstream 5661 false scaffold_30: 1-5661 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331403 5274 Embryophyte Singleton cluster - no MSA
123368338 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain