Gene : Pp3s30_90 P. patens v3.3
Defline:  (1 of 1) PTHR32071:SF33 - ACETOACETATE METABOLISM REGULATORY PROTEIN ATOC Genomic Order:  8
Name:  ? Pp3s30_90 Secondary Identifier:  ? PAC:32948503
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s30_90 0.5kb upstream 0.5kb upstream 3168 true scaffold_30: 17856-21023 Physcomitrium patens
Pp3s30_90 0.5kb upstream 0.5kb upstream 500 false scaffold_30: 17856-18355 Physcomitrium patens
Pp3s30_90 0.5kb downstream 0.5kb downstream 3168 true scaffold_30: 18356-21523 Physcomitrium patens
Pp3s30_90 0.5kb downstream 0.5kb downstream 500 false scaffold_30: 21024-21523 Physcomitrium patens
Pp3s30_90 1.0kb upstream 1.0kb upstream 3668 true scaffold_30: 17356-21023 Physcomitrium patens
Pp3s30_90 1.0kb upstream 1.0kb upstream 1000 false scaffold_30: 17356-18355 Physcomitrium patens
Pp3s30_90 1.0kb downstream 1.0kb downstream 3668 true scaffold_30: 18356-22023 Physcomitrium patens
Pp3s30_90 1.0kb downstream 1.0kb downstream 1000 false scaffold_30: 21024-22023 Physcomitrium patens
Pp3s30_90 2.0kb upstream 2.0kb upstream 4668 true scaffold_30: 16356-21023 Physcomitrium patens
Pp3s30_90 2.0kb upstream 2.0kb upstream 2000 false scaffold_30: 16356-18355 Physcomitrium patens
Pp3s30_90 2.0kb downstream 2.0kb downstream 4668 true scaffold_30: 18356-23023 Physcomitrium patens
Pp3s30_90 2.0kb downstream 2.0kb downstream 2000 false scaffold_30: 21024-23023 Physcomitrium patens
Pp3s30_90 5.0kb upstream 5.0kb upstream 7668 true scaffold_30: 13356-21023 Physcomitrium patens
Pp3s30_90 5.0kb upstream 5.0kb upstream 5000 false scaffold_30: 13356-18355 Physcomitrium patens
Pp3s30_90 5.0kb downstream 5.0kb downstream 7668 true scaffold_30: 18356-26023 Physcomitrium patens
Pp3s30_90 5.0kb downstream 5.0kb downstream 5000 false scaffold_30: 21024-26023 Physcomitrium patens
Pp3s30_90 10.0kb upstream 10.0kb upstream 12668 true scaffold_30: 8356-21023 Physcomitrium patens
Pp3s30_90 10.0kb upstream 10.0kb upstream 10000 false scaffold_30: 8356-18355 Physcomitrium patens
Pp3s30_90 10.0kb downstream 10.0kb downstream 12668 true scaffold_30: 18356-31023 Physcomitrium patens
Pp3s30_90 10.0kb downstream 10.0kb downstream 10000 false scaffold_30: 21024-31023 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331459 5274 Embryophyte Singleton cluster - no MSA
123368390 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain