Gene : Pp3s42_360 P. patens v3.3
Defline:  (1 of 1) PF01757 - Acyltransferase family (Acyl_transf_3) Genomic Order:  34
Name:  ? Pp3s42_360 Secondary Identifier:  ? PAC:32945165
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s42_360 0.5kb upstream 0.5kb upstream 17170 true scaffold_42: 98162-115331 Physcomitrium patens
Pp3s42_360 0.5kb upstream 0.5kb upstream 500 false scaffold_42: 114832-115331 Physcomitrium patens
Pp3s42_360 0.5kb downstream 0.5kb downstream 17170 true scaffold_42: 97662-114831 Physcomitrium patens
Pp3s42_360 0.5kb downstream 0.5kb downstream 500 false scaffold_42: 97662-98161 Physcomitrium patens
Pp3s42_360 1.0kb upstream 1.0kb upstream 17670 true scaffold_42: 98162-115831 Physcomitrium patens
Pp3s42_360 1.0kb upstream 1.0kb upstream 1000 false scaffold_42: 114832-115831 Physcomitrium patens
Pp3s42_360 1.0kb downstream 1.0kb downstream 17670 true scaffold_42: 97162-114831 Physcomitrium patens
Pp3s42_360 1.0kb downstream 1.0kb downstream 1000 false scaffold_42: 97162-98161 Physcomitrium patens
Pp3s42_360 2.0kb upstream 2.0kb upstream 18670 true scaffold_42: 98162-116831 Physcomitrium patens
Pp3s42_360 2.0kb upstream 2.0kb upstream 2000 false scaffold_42: 114832-116831 Physcomitrium patens
Pp3s42_360 2.0kb downstream 2.0kb downstream 18670 true scaffold_42: 96162-114831 Physcomitrium patens
Pp3s42_360 2.0kb downstream 2.0kb downstream 2000 false scaffold_42: 96162-98161 Physcomitrium patens
Pp3s42_360 5.0kb upstream 5.0kb upstream 21670 true scaffold_42: 98162-119831 Physcomitrium patens
Pp3s42_360 5.0kb upstream 5.0kb upstream 5000 false scaffold_42: 114832-119831 Physcomitrium patens
Pp3s42_360 5.0kb downstream 5.0kb downstream 21670 true scaffold_42: 93162-114831 Physcomitrium patens
Pp3s42_360 5.0kb downstream 5.0kb downstream 5000 false scaffold_42: 93162-98161 Physcomitrium patens
Pp3s42_360 10.0kb upstream 10.0kb upstream 24220 true scaffold_42: 98162-122381 Physcomitrium patens
Pp3s42_360 10.0kb upstream 10.0kb upstream 7550 false scaffold_42: 114832-122381 Physcomitrium patens
Pp3s42_360 10.0kb downstream 10.0kb downstream 26670 true scaffold_42: 88162-114831 Physcomitrium patens
Pp3s42_360 10.0kb downstream 10.0kb downstream 10000 false scaffold_42: 88162-98161 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121330845 5274 Embryophyte Singleton cluster - no MSA
123367803 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain