Gene : Pp3s46_160 P. patens v3.3
Defline:  (1 of 1) PF01546//PF03606//PF07687 - Peptidase family M20/M25/M40 (Peptidase_M20) // C4-dicarboxylate anaerobic carrier (DcuC) // Peptidase dimerisation domain (M20_dimer) Genomic Order:  18
Name:  ? Pp3s46_160 Secondary Identifier:  ? PAC:32948227
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s46_160 0.5kb upstream 0.5kb upstream 3077 true scaffold_46: 30351-33427 Physcomitrium patens
Pp3s46_160 0.5kb upstream 0.5kb upstream 500 false scaffold_46: 32928-33427 Physcomitrium patens
Pp3s46_160 0.5kb downstream 0.5kb downstream 3077 true scaffold_46: 29851-32927 Physcomitrium patens
Pp3s46_160 0.5kb downstream 0.5kb downstream 500 false scaffold_46: 29851-30350 Physcomitrium patens
Pp3s46_160 1.0kb upstream 1.0kb upstream 3577 true scaffold_46: 30351-33927 Physcomitrium patens
Pp3s46_160 1.0kb upstream 1.0kb upstream 1000 false scaffold_46: 32928-33927 Physcomitrium patens
Pp3s46_160 1.0kb downstream 1.0kb downstream 3577 true scaffold_46: 29351-32927 Physcomitrium patens
Pp3s46_160 1.0kb downstream 1.0kb downstream 1000 false scaffold_46: 29351-30350 Physcomitrium patens
Pp3s46_160 2.0kb upstream 2.0kb upstream 4577 true scaffold_46: 30351-34927 Physcomitrium patens
Pp3s46_160 2.0kb upstream 2.0kb upstream 2000 false scaffold_46: 32928-34927 Physcomitrium patens
Pp3s46_160 2.0kb downstream 2.0kb downstream 4577 true scaffold_46: 28351-32927 Physcomitrium patens
Pp3s46_160 2.0kb downstream 2.0kb downstream 2000 false scaffold_46: 28351-30350 Physcomitrium patens
Pp3s46_160 5.0kb upstream 5.0kb upstream 7577 true scaffold_46: 30351-37927 Physcomitrium patens
Pp3s46_160 5.0kb upstream 5.0kb upstream 5000 false scaffold_46: 32928-37927 Physcomitrium patens
Pp3s46_160 5.0kb downstream 5.0kb downstream 7577 true scaffold_46: 25351-32927 Physcomitrium patens
Pp3s46_160 5.0kb downstream 5.0kb downstream 5000 false scaffold_46: 25351-30350 Physcomitrium patens
Pp3s46_160 10.0kb upstream 10.0kb upstream 12577 true scaffold_46: 30351-42927 Physcomitrium patens
Pp3s46_160 10.0kb upstream 10.0kb upstream 10000 false scaffold_46: 32928-42927 Physcomitrium patens
Pp3s46_160 10.0kb downstream 10.0kb downstream 12577 true scaffold_46: 20351-32927 Physcomitrium patens
Pp3s46_160 10.0kb downstream 10.0kb downstream 10000 false scaffold_46: 20351-30350 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121336558 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain