Gene : Pp3s46_310 P. patens v3.3
Defline:  (1 of 1) PTHR11119:SF49 - XANTHINE/URACIL PERMEASE FAMILY PROTEIN Genomic Order:  27
Name:  ? Pp3s46_310 Secondary Identifier:  ? PAC:32948203
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens PWY-7183 Physcomitrium patens pathologic  
Ppatens PWY-7196 Physcomitrium patens pathologic  
Ppatens PWY-7208 Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s46_310 0.5kb upstream 0.5kb upstream 2647 true scaffold_46: 66620-69266 Physcomitrium patens
Pp3s46_310 0.5kb upstream 0.5kb upstream 500 false scaffold_46: 68767-69266 Physcomitrium patens
Pp3s46_310 0.5kb downstream 0.5kb downstream 2647 true scaffold_46: 66120-68766 Physcomitrium patens
Pp3s46_310 0.5kb downstream 0.5kb downstream 500 false scaffold_46: 66120-66619 Physcomitrium patens
Pp3s46_310 1.0kb upstream 1.0kb upstream 3147 true scaffold_46: 66620-69766 Physcomitrium patens
Pp3s46_310 1.0kb upstream 1.0kb upstream 1000 false scaffold_46: 68767-69766 Physcomitrium patens
Pp3s46_310 1.0kb downstream 1.0kb downstream 3147 true scaffold_46: 65620-68766 Physcomitrium patens
Pp3s46_310 1.0kb downstream 1.0kb downstream 1000 false scaffold_46: 65620-66619 Physcomitrium patens
Pp3s46_310 2.0kb upstream 2.0kb upstream 4147 true scaffold_46: 66620-70766 Physcomitrium patens
Pp3s46_310 2.0kb upstream 2.0kb upstream 2000 false scaffold_46: 68767-70766 Physcomitrium patens
Pp3s46_310 2.0kb downstream 2.0kb downstream 4147 true scaffold_46: 64620-68766 Physcomitrium patens
Pp3s46_310 2.0kb downstream 2.0kb downstream 2000 false scaffold_46: 64620-66619 Physcomitrium patens
Pp3s46_310 5.0kb upstream 5.0kb upstream 7147 true scaffold_46: 66620-73766 Physcomitrium patens
Pp3s46_310 5.0kb upstream 5.0kb upstream 5000 false scaffold_46: 68767-73766 Physcomitrium patens
Pp3s46_310 5.0kb downstream 5.0kb downstream 7147 true scaffold_46: 61620-68766 Physcomitrium patens
Pp3s46_310 5.0kb downstream 5.0kb downstream 5000 false scaffold_46: 61620-66619 Physcomitrium patens
Pp3s46_310 10.0kb upstream 10.0kb upstream 12147 true scaffold_46: 66620-78766 Physcomitrium patens
Pp3s46_310 10.0kb upstream 10.0kb upstream 10000 false scaffold_46: 68767-78766 Physcomitrium patens
Pp3s46_310 10.0kb downstream 10.0kb downstream 12147 true scaffold_46: 56620-68766 Physcomitrium patens
Pp3s46_310 10.0kb downstream 10.0kb downstream 10000 false scaffold_46: 56620-66619 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331255 5274 Embryophyte Singleton cluster - no MSA
123428829 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain