Gene : Pp3s34_504 P. patens v3.3
Defline:  (1 of 1) PTHR30363 - HTH-TYPE TRANSCRIPTIONAL REGULATOR SRLR-RELATED Genomic Order:  56
Name:  ? Pp3s34_504 Secondary Identifier:  ? PAC:32948281
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s34_504 0.5kb upstream 0.5kb upstream 1265 true scaffold_34: 161971-163235 Physcomitrium patens
Pp3s34_504 0.5kb upstream 0.5kb upstream 500 false scaffold_34: 162736-163235 Physcomitrium patens
Pp3s34_504 0.5kb downstream 0.5kb downstream 1265 true scaffold_34: 161471-162735 Physcomitrium patens
Pp3s34_504 0.5kb downstream 0.5kb downstream 500 false scaffold_34: 161471-161970 Physcomitrium patens
Pp3s34_504 1.0kb upstream 1.0kb upstream 1765 true scaffold_34: 161971-163735 Physcomitrium patens
Pp3s34_504 1.0kb upstream 1.0kb upstream 1000 false scaffold_34: 162736-163735 Physcomitrium patens
Pp3s34_504 1.0kb downstream 1.0kb downstream 1765 true scaffold_34: 160971-162735 Physcomitrium patens
Pp3s34_504 1.0kb downstream 1.0kb downstream 1000 false scaffold_34: 160971-161970 Physcomitrium patens
Pp3s34_504 2.0kb upstream 2.0kb upstream 2765 true scaffold_34: 161971-164735 Physcomitrium patens
Pp3s34_504 2.0kb upstream 2.0kb upstream 2000 false scaffold_34: 162736-164735 Physcomitrium patens
Pp3s34_504 2.0kb downstream 2.0kb downstream 2765 true scaffold_34: 159971-162735 Physcomitrium patens
Pp3s34_504 2.0kb downstream 2.0kb downstream 2000 false scaffold_34: 159971-161970 Physcomitrium patens
Pp3s34_504 5.0kb upstream 5.0kb upstream 5765 true scaffold_34: 161971-167735 Physcomitrium patens
Pp3s34_504 5.0kb upstream 5.0kb upstream 5000 false scaffold_34: 162736-167735 Physcomitrium patens
Pp3s34_504 5.0kb downstream 5.0kb downstream 5765 true scaffold_34: 156971-162735 Physcomitrium patens
Pp3s34_504 5.0kb downstream 5.0kb downstream 5000 false scaffold_34: 156971-161970 Physcomitrium patens
Pp3s34_504 10.0kb upstream 10.0kb upstream 10765 true scaffold_34: 161971-172735 Physcomitrium patens
Pp3s34_504 10.0kb upstream 10.0kb upstream 10000 false scaffold_34: 162736-172735 Physcomitrium patens
Pp3s34_504 10.0kb downstream 10.0kb downstream 10765 true scaffold_34: 151971-162735 Physcomitrium patens
Pp3s34_504 10.0kb downstream 10.0kb downstream 10000 false scaffold_34: 151971-161970 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331308 5274 Embryophyte Singleton cluster - no MSA
123368248 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain