Gene : Pp3s32_170 P. patens v3.3
Defline:  (1 of 2) PTHR30290 - PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER Genomic Order:  16
Name:  ? Pp3s32_170 Secondary Identifier:  ? PAC:32948394
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s32_170 0.5kb upstream 0.5kb upstream 3275 true scaffold_32: 61772-65046 Physcomitrium patens
Pp3s32_170 0.5kb upstream 0.5kb upstream 500 false scaffold_32: 61772-62271 Physcomitrium patens
Pp3s32_170 0.5kb downstream 0.5kb downstream 3275 true scaffold_32: 62272-65546 Physcomitrium patens
Pp3s32_170 0.5kb downstream 0.5kb downstream 500 false scaffold_32: 65047-65546 Physcomitrium patens
Pp3s32_170 1.0kb upstream 1.0kb upstream 3775 true scaffold_32: 61272-65046 Physcomitrium patens
Pp3s32_170 1.0kb upstream 1.0kb upstream 1000 false scaffold_32: 61272-62271 Physcomitrium patens
Pp3s32_170 1.0kb downstream 1.0kb downstream 3775 true scaffold_32: 62272-66046 Physcomitrium patens
Pp3s32_170 1.0kb downstream 1.0kb downstream 1000 false scaffold_32: 65047-66046 Physcomitrium patens
Pp3s32_170 2.0kb upstream 2.0kb upstream 4775 true scaffold_32: 60272-65046 Physcomitrium patens
Pp3s32_170 2.0kb upstream 2.0kb upstream 2000 false scaffold_32: 60272-62271 Physcomitrium patens
Pp3s32_170 2.0kb downstream 2.0kb downstream 4775 true scaffold_32: 62272-67046 Physcomitrium patens
Pp3s32_170 2.0kb downstream 2.0kb downstream 2000 false scaffold_32: 65047-67046 Physcomitrium patens
Pp3s32_170 5.0kb upstream 5.0kb upstream 7775 true scaffold_32: 57272-65046 Physcomitrium patens
Pp3s32_170 5.0kb upstream 5.0kb upstream 5000 false scaffold_32: 57272-62271 Physcomitrium patens
Pp3s32_170 5.0kb downstream 5.0kb downstream 7775 true scaffold_32: 62272-70046 Physcomitrium patens
Pp3s32_170 5.0kb downstream 5.0kb downstream 5000 false scaffold_32: 65047-70046 Physcomitrium patens
Pp3s32_170 10.0kb upstream 10.0kb upstream 12775 true scaffold_32: 52272-65046 Physcomitrium patens
Pp3s32_170 10.0kb upstream 10.0kb upstream 10000 false scaffold_32: 52272-62271 Physcomitrium patens
Pp3s32_170 10.0kb downstream 10.0kb downstream 12775 true scaffold_32: 62272-75046 Physcomitrium patens
Pp3s32_170 10.0kb downstream 10.0kb downstream 10000 false scaffold_32: 65047-75046 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331377 5274 Embryophyte Singleton cluster - no MSA
123368314 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain